Protein–RNA interactions for Protein: P03999

OPN1SW, Short-wave-sensitive opsin 1, humanhuman

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
OPN1SWP03999 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
OPN1SWP03999 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC15.12■□□□□ 0.01
OPN1SWP03999 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC15.12■□□□□ 0.01
OPN1SWP03999 AC010507.1-201ENST00000633895 436 ntBASIC15.12■□□□□ 0.01
OPN1SWP03999 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
OPN1SWP03999 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
OPN1SWP03999 NOS1AP-205ENST00000493151 5559 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
OPN1SWP03999 SLC25A33-201ENST00000302692 3854 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
OPN1SWP03999 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
OPN1SWP03999 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC15.12■□□□□ 0.01
OPN1SWP03999 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
OPN1SWP03999 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
OPN1SWP03999 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
OPN1SWP03999 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC15.12■□□□□ 0.01
OPN1SWP03999 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
OPN1SWP03999 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC15.12■□□□□ 0.01
OPN1SWP03999 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
OPN1SWP03999 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
OPN1SWP03999 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
OPN1SWP03999 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
OPN1SWP03999 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
OPN1SWP03999 AL513477.1-201ENST00000602865 2407 ntBASIC15.12■□□□□ 0.01
OPN1SWP03999 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
OPN1SWP03999 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
OPN1SWP03999 ZSWIM8-201ENST00000398706 6062 ntTSL 2 BASIC15.12■□□□□ 0.01
OPN1SWP03999 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
OPN1SWP03999 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
OPN1SWP03999 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
OPN1SWP03999 CAPN2-201ENST00000295006 3573 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
OPN1SWP03999 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
OPN1SWP03999 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC15.11■□□□□ 0.01
OPN1SWP03999 GRID2IP-202ENST00000452113 3428 ntTSL 5 BASIC15.11■□□□□ 0.01
OPN1SWP03999 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC15.11■□□□□ 0.01
OPN1SWP03999 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
OPN1SWP03999 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
OPN1SWP03999 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC15.11■□□□□ 0.01
OPN1SWP03999 AC126755.1-201ENST00000525846 6405 ntBASIC15.11■□□□□ 0.01
OPN1SWP03999 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
OPN1SWP03999 STAT5B-201ENST00000293328 5103 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
OPN1SWP03999 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC15.11■□□□□ 0.01
OPN1SWP03999 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC15.11■□□□□ 0.01
OPN1SWP03999 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
OPN1SWP03999 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC15.11■□□□□ 0.01
OPN1SWP03999 VN2R19P-201ENST00000442399 1052 ntBASIC15.11■□□□□ 0.01
OPN1SWP03999 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC15.11■□□□□ 0.01
OPN1SWP03999 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC15.11■□□□□ 0.01
OPN1SWP03999 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC15.11■□□□□ 0.01
OPN1SWP03999 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC15.11■□□□□ 0.01
OPN1SWP03999 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
OPN1SWP03999 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC15.11■□□□□ 0.01
OPN1SWP03999 AL031008.1-201ENST00000619963 541 ntBASIC15.11■□□□□ 0.01
OPN1SWP03999 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC15.11■□□□□ 0.01
OPN1SWP03999 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
OPN1SWP03999 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
OPN1SWP03999 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC15.11■□□□□ 0.01
OPN1SWP03999 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
OPN1SWP03999 ECE1-204ENST00000415912 5099 ntAPPRIS ALT1 TSL 1 (best) BASIC15.11■□□□□ 0.01
OPN1SWP03999 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
OPN1SWP03999 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC15.11■□□□□ 0.01
OPN1SWP03999 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
OPN1SWP03999 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC15.11■□□□□ 0.01
OPN1SWP03999 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC15.11■□□□□ 0.01
OPN1SWP03999 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
OPN1SWP03999 EPB41L3-206ENST00000544123 3972 ntAPPRIS ALT2 TSL 2 BASIC15.11■□□□□ 0.01
OPN1SWP03999 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC15.11■□□□□ 0.01
OPN1SWP03999 LINC02228-204ENST00000642115 2962 ntBASIC15.11■□□□□ 0.01
OPN1SWP03999 LCOR-202ENST00000356016 4834 ntAPPRIS P3 TSL 2 BASIC15.11■□□□□ 0.01
OPN1SWP03999 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
OPN1SWP03999 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
OPN1SWP03999 P2RX5-TAX1BP3-201ENST00000550383 5905 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
OPN1SWP03999 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
OPN1SWP03999 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC15.11■□□□□ 0.01
OPN1SWP03999 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC15.11■□□□□ 0.01
OPN1SWP03999 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC15.1■□□□□ 0.01
OPN1SWP03999 TNRC18P2-201ENST00000417666 2714 ntBASIC15.1■□□□□ 0.01
OPN1SWP03999 ALDH1A2-201ENST00000249750 4098 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
OPN1SWP03999 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
OPN1SWP03999 KIAA1211-206ENST00000541073 4117 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
OPN1SWP03999 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
OPN1SWP03999 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
OPN1SWP03999 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC15.1■□□□□ 0.01
OPN1SWP03999 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
OPN1SWP03999 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
OPN1SWP03999 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
OPN1SWP03999 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
OPN1SWP03999 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
OPN1SWP03999 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC15.1■□□□□ 0.01
OPN1SWP03999 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC15.1■□□□□ 0.01
OPN1SWP03999 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
OPN1SWP03999 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC15.1■□□□□ 0.01
OPN1SWP03999 CRYGEP-201ENST00000412192 528 ntBASIC15.1■□□□□ 0.01
OPN1SWP03999 AL031284.1-201ENST00000419297 478 ntBASIC15.1■□□□□ 0.01
OPN1SWP03999 AC009947.1-201ENST00000444350 727 ntBASIC15.1■□□□□ 0.01
OPN1SWP03999 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC15.1■□□□□ 0.01
OPN1SWP03999 UNC93B6-202ENST00000528242 690 ntBASIC15.1■□□□□ 0.01
OPN1SWP03999 RPL28-209ENST00000560055 670 ntTSL 3 BASIC15.1■□□□□ 0.01
OPN1SWP03999 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC15.1■□□□□ 0.01
OPN1SWP03999 TCAP-202ENST00000578283 583 ntTSL 5 BASIC15.1■□□□□ 0.01
OPN1SWP03999 PRKN-208ENST00000610470 531 ntTSL 2 BASIC15.1■□□□□ 0.01
OPN1SWP03999 PRKN-209ENST00000612485 225 ntTSL 5 BASIC15.1■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms