Protein–RNA interactions for Protein: P02656

APOC3, Apolipoprotein C-III, humanhuman

Predictions only

Length 99 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC3P02656 TBKBP1-201ENST00000361722 4121 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
APOC3P02656 MICB-202ENST00000399150 2346 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
APOC3P02656 SEPT6-201ENST00000343984 2693 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
APOC3P02656 TGFBR3-201ENST00000212355 6465 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
APOC3P02656 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
APOC3P02656 NEU3-201ENST00000294064 6728 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
APOC3P02656 NLRP7-209ENST00000592784 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
APOC3P02656 TNPO2-218ENST00000592287 2914 ntAPPRIS P4 TSL 1 (best) BASIC12.97□□□□□ -0.33
APOC3P02656 HSD17B4-215ENST00000510025 2589 ntTSL 2 BASIC12.97□□□□□ -0.33
APOC3P02656 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC12.97□□□□□ -0.33
APOC3P02656 MGC16275-201ENST00000499670 2501 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
APOC3P02656 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
APOC3P02656 TAB2-208ENST00000636456 3092 ntTSL 5 BASIC12.97□□□□□ -0.33
APOC3P02656 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC12.97□□□□□ -0.33
APOC3P02656 SPECC1L-ADORA2A-201ENST00000358654 6204 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
APOC3P02656 AC105250.1-201ENST00000509378 2057 ntBASIC12.97□□□□□ -0.33
APOC3P02656 ARMC5-201ENST00000268314 3612 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
APOC3P02656 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC12.96□□□□□ -0.33
APOC3P02656 PLCD1-204ENST00000463876 2963 ntAPPRIS ALT1 TSL 2 BASIC12.96□□□□□ -0.33
APOC3P02656 GIPR-205ENST00000590918 3289 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
APOC3P02656 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
APOC3P02656 PPP2R5E-201ENST00000337537 6659 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
APOC3P02656 VCP-201ENST00000358901 4370 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
APOC3P02656 AL512306.2-201ENST00000444037 2219 ntTSL 2 BASIC12.96□□□□□ -0.33
APOC3P02656 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
APOC3P02656 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC12.96□□□□□ -0.33
APOC3P02656 ZNF778-202ENST00000433976 3608 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
APOC3P02656 CATSPERE-201ENST00000366531 3038 ntAPPRIS ALT2 TSL 2 BASIC12.96□□□□□ -0.33
APOC3P02656 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
APOC3P02656 ALDOA-228ENST00000627059 2402 ntAPPRIS ALT1 TSL 5 BASIC12.96□□□□□ -0.33
APOC3P02656 CES3-201ENST00000303334 3834 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
APOC3P02656 ENSA-206ENST00000361631 725 ntTSL 2 BASIC12.96□□□□□ -0.33
APOC3P02656 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
APOC3P02656 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
APOC3P02656 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC12.96□□□□□ -0.33
APOC3P02656 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC12.96□□□□□ -0.33
APOC3P02656 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC12.96□□□□□ -0.33
APOC3P02656 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC12.96□□□□□ -0.33
APOC3P02656 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC12.96□□□□□ -0.33
APOC3P02656 AC011298.2-201ENST00000617989 482 ntBASIC12.96□□□□□ -0.33
APOC3P02656 AC092634.8-201ENST00000639687 773 ntTSL 5 BASIC12.96□□□□□ -0.33
APOC3P02656 R3HDM2-204ENST00000402412 4372 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
APOC3P02656 PKM-220ENST00000568459 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC12.96□□□□□ -0.33
APOC3P02656 UBE3A-209ENST00000625778 3217 ntTSL 5 BASIC12.96□□□□□ -0.33
APOC3P02656 ZHX2-201ENST00000314393 4624 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
APOC3P02656 KIRREL2-203ENST00000360202 2942 ntAPPRIS P4 TSL 1 (best) BASIC12.96□□□□□ -0.33
APOC3P02656 SHROOM1-203ENST00000378679 4019 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
APOC3P02656 WDR5-201ENST00000358625 3151 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
APOC3P02656 MED12L-202ENST00000309237 2862 ntAPPRIS ALT2 TSL 2 BASIC12.96□□□□□ -0.34
APOC3P02656 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.34
APOC3P02656 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.34
APOC3P02656 ZFP36L2-201ENST00000282388 3696 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
APOC3P02656 TCF3-201ENST00000262965 4451 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.34
APOC3P02656 IL3RA-201ENST00000331035 1706 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
APOC3P02656 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
APOC3P02656 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC12.96□□□□□ -0.34
APOC3P02656 PRKCSH-212ENST00000591462 2209 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.34
APOC3P02656 DISC1-221ENST00000620189 6689 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.34
APOC3P02656 BICDL2-204ENST00000573514 3519 ntTSL 2 BASIC12.96□□□□□ -0.34
APOC3P02656 ZMIZ2-206ENST00000441627 5089 ntAPPRIS P4 TSL 1 (best) BASIC12.96□□□□□ -0.34
APOC3P02656 MAPRE2-201ENST00000300249 4265 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.34
APOC3P02656 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
APOC3P02656 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC12.96□□□□□ -0.34
APOC3P02656 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
APOC3P02656 AC022028.2-201ENST00000474115 2619 ntTSL 2 BASIC12.95□□□□□ -0.34
APOC3P02656 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
APOC3P02656 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.34
APOC3P02656 AATBC-201ENST00000400385 4598 ntTSL 2 BASIC12.95□□□□□ -0.34
APOC3P02656 NHSL1-202ENST00000343505 6535 ntAPPRIS P3 TSL 5 BASIC12.95□□□□□ -0.34
APOC3P02656 NEAT1-201ENST00000499732 1811 ntTSL 2 BASIC12.95□□□□□ -0.34
APOC3P02656 CRTC1-202ENST00000338797 6929 ntAPPRIS ALT1 TSL 1 (best) BASIC12.95□□□□□ -0.34
APOC3P02656 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
APOC3P02656 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
APOC3P02656 METTL13-202ENST00000362019 3022 ntTSL 2 BASIC12.95□□□□□ -0.34
APOC3P02656 SPACA9-203ENST00000372136 2536 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
APOC3P02656 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC12.95□□□□□ -0.34
APOC3P02656 AP001062.1-201ENST00000448927 4354 ntTSL 2 BASIC12.95□□□□□ -0.34
APOC3P02656 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC12.95□□□□□ -0.34
APOC3P02656 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
APOC3P02656 ABCB7-202ENST00000339447 2234 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
APOC3P02656 DNAH14-204ENST00000366849 2215 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
APOC3P02656 CACNA2D1-202ENST00000356860 7563 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
APOC3P02656 PRNP-201ENST00000379440 2657 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
APOC3P02656 AL591623.1-201ENST00000417786 1960 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
APOC3P02656 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC12.95□□□□□ -0.34
APOC3P02656 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC12.95□□□□□ -0.34
APOC3P02656 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC12.95□□□□□ -0.34
APOC3P02656 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC12.95□□□□□ -0.34
APOC3P02656 IGHV3-52-201ENST00000519770 353 ntBASIC12.95□□□□□ -0.34
APOC3P02656 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
APOC3P02656 VPS53-216ENST00000574029 585 ntTSL 4 BASIC12.95□□□□□ -0.34
APOC3P02656 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC12.95□□□□□ -0.34
APOC3P02656 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC12.95□□□□□ -0.34
APOC3P02656 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC12.95□□□□□ -0.34
APOC3P02656 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
APOC3P02656 ATE1-201ENST00000224652 4930 ntAPPRIS P5 TSL 1 (best) BASIC12.95□□□□□ -0.34
APOC3P02656 SF1-202ENST00000334944 3094 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
APOC3P02656 RAB6C-201ENST00000410061 3075 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
APOC3P02656 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC12.95□□□□□ -0.34
APOC3P02656 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 43.3 ms