Protein–RNA interactions for Protein: O60481

ZIC3, Zinc finger protein ZIC 3, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC3O60481 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC14.47□□□□□ -0.09
ZIC3O60481 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC14.47□□□□□ -0.09
ZIC3O60481 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
ZIC3O60481 AC044860.1-202ENST00000559481 777 ntBASIC14.47□□□□□ -0.09
ZIC3O60481 PRR29-204ENST00000577953 565 ntTSL 4 BASIC14.47□□□□□ -0.09
ZIC3O60481 AC092364.2-202ENST00000597012 1073 ntBASIC14.47□□□□□ -0.09
ZIC3O60481 SPIB-207ENST00000597855 564 ntTSL 4 BASIC14.47□□□□□ -0.09
ZIC3O60481 AC008738.7-201ENST00000609744 511 ntBASIC14.47□□□□□ -0.09
ZIC3O60481 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC14.47□□□□□ -0.09
ZIC3O60481 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
ZIC3O60481 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC14.47□□□□□ -0.09
ZIC3O60481 REXO1L1P-202ENST00000608646 1974 ntBASIC14.47□□□□□ -0.09
ZIC3O60481 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
ZIC3O60481 ACE-204ENST00000428043 5120 ntTSL 2 BASIC14.47□□□□□ -0.09
ZIC3O60481 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
ZIC3O60481 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
ZIC3O60481 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC14.46□□□□□ -0.09
ZIC3O60481 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
ZIC3O60481 AC069224.1-201ENST00000566372 1715 ntBASIC14.46□□□□□ -0.09
ZIC3O60481 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
ZIC3O60481 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
ZIC3O60481 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
ZIC3O60481 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
ZIC3O60481 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
ZIC3O60481 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
ZIC3O60481 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
ZIC3O60481 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
ZIC3O60481 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
ZIC3O60481 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
ZIC3O60481 MIR661-201ENST00000384842 89 ntBASIC14.46□□□□□ -0.09
ZIC3O60481 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
ZIC3O60481 PHKG1P2-201ENST00000457537 863 ntBASIC14.46□□□□□ -0.09
ZIC3O60481 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC14.46□□□□□ -0.09
ZIC3O60481 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC14.46□□□□□ -0.09
ZIC3O60481 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC14.46□□□□□ -0.09
ZIC3O60481 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC14.46□□□□□ -0.09
ZIC3O60481 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
ZIC3O60481 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC14.46□□□□□ -0.09
ZIC3O60481 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC14.46□□□□□ -0.09
ZIC3O60481 MIR4745-201ENST00000577608 62 ntBASIC14.46□□□□□ -0.09
ZIC3O60481 RN7SL204P-201ENST00000582831 262 ntBASIC14.46□□□□□ -0.09
ZIC3O60481 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC14.46□□□□□ -0.09
ZIC3O60481 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC14.46□□□□□ -0.09
ZIC3O60481 TEX48-202ENST00000612244 662 ntTSL 3 BASIC14.46□□□□□ -0.09
ZIC3O60481 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC14.46□□□□□ -0.09
ZIC3O60481 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
ZIC3O60481 AC011477.6-201ENST00000604980 1927 ntBASIC14.46□□□□□ -0.09
ZIC3O60481 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
ZIC3O60481 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
ZIC3O60481 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.1
ZIC3O60481 CDC14C-201ENST00000428251 1719 ntBASIC14.46□□□□□ -0.1
ZIC3O60481 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
ZIC3O60481 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
ZIC3O60481 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.1
ZIC3O60481 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
ZIC3O60481 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
ZIC3O60481 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
ZIC3O60481 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC14.46□□□□□ -0.1
ZIC3O60481 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
ZIC3O60481 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC14.45□□□□□ -0.1
ZIC3O60481 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
ZIC3O60481 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC14.45□□□□□ -0.1
ZIC3O60481 AL603832.2-201ENST00000566195 2125 ntBASIC14.45□□□□□ -0.1
ZIC3O60481 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
ZIC3O60481 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
ZIC3O60481 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
ZIC3O60481 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
ZIC3O60481 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
ZIC3O60481 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC14.45□□□□□ -0.1
ZIC3O60481 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC14.45□□□□□ -0.1
ZIC3O60481 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
ZIC3O60481 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC14.45□□□□□ -0.1
ZIC3O60481 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC14.45□□□□□ -0.1
ZIC3O60481 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC14.45□□□□□ -0.1
ZIC3O60481 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
ZIC3O60481 KLK8-202ENST00000320838 456 ntTSL 5 BASIC14.45□□□□□ -0.1
ZIC3O60481 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
ZIC3O60481 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
ZIC3O60481 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC14.45□□□□□ -0.1
ZIC3O60481 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC14.45□□□□□ -0.1
ZIC3O60481 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC14.45□□□□□ -0.1
ZIC3O60481 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC14.45□□□□□ -0.1
ZIC3O60481 SDHAP3-202ENST00000515467 728 ntBASIC14.45□□□□□ -0.1
ZIC3O60481 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
ZIC3O60481 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
ZIC3O60481 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC14.45□□□□□ -0.1
ZIC3O60481 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC14.45□□□□□ -0.1
ZIC3O60481 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
ZIC3O60481 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
ZIC3O60481 BANP-204ENST00000393208 2283 ntTSL 2 BASIC14.45□□□□□ -0.1
ZIC3O60481 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC14.45□□□□□ -0.1
ZIC3O60481 LINC02447-202ENST00000501888 2146 ntBASIC14.45□□□□□ -0.1
ZIC3O60481 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC14.45□□□□□ -0.1
ZIC3O60481 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
ZIC3O60481 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC14.45□□□□□ -0.1
ZIC3O60481 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
ZIC3O60481 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC14.45□□□□□ -0.1
ZIC3O60481 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC14.45□□□□□ -0.1
ZIC3O60481 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC14.45□□□□□ -0.1
ZIC3O60481 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 47.9 ms