Protein–RNA interactions for Protein: O60232

SSSCA1, Sjoegren syndrome/scleroderma autoantigen 1, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1O60232 TOB2P1-201ENST00000469761 992 ntBASIC13.23□□□□□ -0.29
SSSCA1O60232 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
SSSCA1O60232 AC087641.1-201ENST00000557561 1021 ntBASIC13.23□□□□□ -0.29
SSSCA1O60232 LINC01238-205ENST00000567549 1107 ntBASIC13.23□□□□□ -0.29
SSSCA1O60232 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC13.23□□□□□ -0.29
SSSCA1O60232 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
SSSCA1O60232 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
SSSCA1O60232 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
SSSCA1O60232 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
SSSCA1O60232 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
SSSCA1O60232 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC13.23□□□□□ -0.29
SSSCA1O60232 SMAD2-202ENST00000356825 10445 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
SSSCA1O60232 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
SSSCA1O60232 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
SSSCA1O60232 TSC2-203ENST00000382538 5264 ntAPPRIS ALT2 TSL 2 BASIC13.23□□□□□ -0.29
SSSCA1O60232 TCAF2P1-201ENST00000291129 2421 ntBASIC13.23□□□□□ -0.29
SSSCA1O60232 SSTR2-201ENST00000357585 7683 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
SSSCA1O60232 ZNF777-201ENST00000247930 3233 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
SSSCA1O60232 C9orf47-201ENST00000334490 4829 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
SSSCA1O60232 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC13.23□□□□□ -0.29
SSSCA1O60232 ITSN2-203ENST00000406921 4563 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
SSSCA1O60232 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC13.23□□□□□ -0.29
SSSCA1O60232 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
SSSCA1O60232 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC13.23□□□□□ -0.29
SSSCA1O60232 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
SSSCA1O60232 AL353732.1-201ENST00000569618 1459 ntBASIC13.23□□□□□ -0.29
SSSCA1O60232 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
SSSCA1O60232 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
SSSCA1O60232 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
SSSCA1O60232 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
SSSCA1O60232 ADAMTS14-201ENST00000373207 5260 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
SSSCA1O60232 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
SSSCA1O60232 ASIC4-202ENST00000358078 2741 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
SSSCA1O60232 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
SSSCA1O60232 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC13.22□□□□□ -0.29
SSSCA1O60232 CDH23-202ENST00000299366 3954 ntTSL 5 BASIC13.22□□□□□ -0.29
SSSCA1O60232 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
SSSCA1O60232 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC13.22□□□□□ -0.29
SSSCA1O60232 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
SSSCA1O60232 ST20-AS1-201ENST00000560255 4223 ntBASIC13.22□□□□□ -0.29
SSSCA1O60232 HIPK3-201ENST00000303296 7408 ntTSL 5 BASIC13.22□□□□□ -0.29
SSSCA1O60232 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
SSSCA1O60232 PPIH-202ENST00000372549 327 ntTSL 3 BASIC13.22□□□□□ -0.29
SSSCA1O60232 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
SSSCA1O60232 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
SSSCA1O60232 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC13.22□□□□□ -0.29
SSSCA1O60232 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
SSSCA1O60232 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC13.22□□□□□ -0.29
SSSCA1O60232 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
SSSCA1O60232 RBSN-204ENST00000449050 903 ntTSL 2 BASIC13.22□□□□□ -0.29
SSSCA1O60232 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC13.22□□□□□ -0.29
SSSCA1O60232 AL136038.3-201ENST00000561909 1096 ntBASIC13.22□□□□□ -0.29
SSSCA1O60232 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC13.22□□□□□ -0.29
SSSCA1O60232 AL139424.1-201ENST00000607572 797 ntBASIC13.22□□□□□ -0.29
SSSCA1O60232 AC012306.2-201ENST00000609350 630 ntBASIC13.22□□□□□ -0.29
SSSCA1O60232 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
SSSCA1O60232 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC13.22□□□□□ -0.29
SSSCA1O60232 AC097493.4-201ENST00000641197 219 ntBASIC13.22□□□□□ -0.29
SSSCA1O60232 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC13.22□□□□□ -0.29
SSSCA1O60232 ARHGEF16-201ENST00000378371 2219 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
SSSCA1O60232 MEGF10-202ENST00000418761 2238 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
SSSCA1O60232 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC13.22□□□□□ -0.29
SSSCA1O60232 SOCS5-202ENST00000394861 4058 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
SSSCA1O60232 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC13.22□□□□□ -0.29
SSSCA1O60232 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC13.22□□□□□ -0.29
SSSCA1O60232 LHFPL4-201ENST00000287585 4880 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
SSSCA1O60232 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC13.22□□□□□ -0.29
SSSCA1O60232 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
SSSCA1O60232 AC023908.3-201ENST00000564211 3047 ntBASIC13.22□□□□□ -0.29
SSSCA1O60232 PRKY-203ENST00000528056 7218 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
SSSCA1O60232 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
SSSCA1O60232 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
SSSCA1O60232 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
SSSCA1O60232 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
SSSCA1O60232 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
SSSCA1O60232 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC13.22□□□□□ -0.29
SSSCA1O60232 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
SSSCA1O60232 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
SSSCA1O60232 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
SSSCA1O60232 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
SSSCA1O60232 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC13.22□□□□□ -0.29
SSSCA1O60232 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC13.22□□□□□ -0.29
SSSCA1O60232 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
SSSCA1O60232 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC13.21□□□□□ -0.29
SSSCA1O60232 TARSL2-201ENST00000335968 3610 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.29
SSSCA1O60232 STXBP6-201ENST00000323944 4132 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
SSSCA1O60232 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
SSSCA1O60232 ZNF385A-205ENST00000546970 2494 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
SSSCA1O60232 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC13.21□□□□□ -0.29
SSSCA1O60232 SORCS1-201ENST00000263054 7272 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
SSSCA1O60232 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC13.21□□□□□ -0.29
SSSCA1O60232 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC13.21□□□□□ -0.29
SSSCA1O60232 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
SSSCA1O60232 INPP5K-201ENST00000320345 2880 ntTSL 5 BASIC13.21□□□□□ -0.29
SSSCA1O60232 GLIDR-202ENST00000625350 2588 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
SSSCA1O60232 CUX1-214ENST00000550008 4350 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
SSSCA1O60232 DNAJC14-201ENST00000317269 3330 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
SSSCA1O60232 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
SSSCA1O60232 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
SSSCA1O60232 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 38.6 ms