Protein–RNA interactions for Protein: O43638

FOXS1, Forkhead box protein S1, humanhuman

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXS1O43638 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC15.11■□□□□ 0.01
FOXS1O43638 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
FOXS1O43638 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
FOXS1O43638 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
FOXS1O43638 AC114501.2-201ENST00000439631 535 ntBASIC15.11■□□□□ 0.01
FOXS1O43638 OARD1-208ENST00000469104 704 ntTSL 2 BASIC15.11■□□□□ 0.01
FOXS1O43638 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC15.11■□□□□ 0.01
FOXS1O43638 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
FOXS1O43638 RAB35-202ENST00000534951 939 ntTSL 2 BASIC15.11■□□□□ 0.01
FOXS1O43638 GREM1-201ENST00000560677 623 ntTSL 4 BASIC15.11■□□□□ 0.01
FOXS1O43638 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC15.11■□□□□ 0.01
FOXS1O43638 AC008761.3-201ENST00000624803 892 ntBASIC15.11■□□□□ 0.01
FOXS1O43638 OARD1-216ENST00000628419 1188 ntTSL 5 BASIC15.11■□□□□ 0.01
FOXS1O43638 AL109936.8-201ENST00000641772 604 ntBASIC15.11■□□□□ 0.01
FOXS1O43638 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
FOXS1O43638 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
FOXS1O43638 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC15.11■□□□□ 0.01
FOXS1O43638 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
FOXS1O43638 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
FOXS1O43638 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
FOXS1O43638 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
FOXS1O43638 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC15.11■□□□□ 0.01
FOXS1O43638 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
FOXS1O43638 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC15.11■□□□□ 0.01
FOXS1O43638 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC15.11■□□□□ 0.01
FOXS1O43638 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
FOXS1O43638 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC15.1■□□□□ 0.01
FOXS1O43638 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
FOXS1O43638 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC15.1■□□□□ 0.01
FOXS1O43638 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
FOXS1O43638 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC15.1■□□□□ 0.01
FOXS1O43638 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC15.1■□□□□ 0.01
FOXS1O43638 AL603832.2-201ENST00000566195 2125 ntBASIC15.1■□□□□ 0.01
FOXS1O43638 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
FOXS1O43638 AC011477.6-201ENST00000604980 1927 ntBASIC15.1■□□□□ 0.01
FOXS1O43638 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
FOXS1O43638 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
FOXS1O43638 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
FOXS1O43638 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
FOXS1O43638 CALY-203ENST00000368558 825 ntTSL 5 BASIC15.1■□□□□ 0.01
FOXS1O43638 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC15.1■□□□□ 0.01
FOXS1O43638 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC15.1■□□□□ 0.01
FOXS1O43638 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC15.1■□□□□ 0.01
FOXS1O43638 PHKG1P2-201ENST00000457537 863 ntBASIC15.1■□□□□ 0.01
FOXS1O43638 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
FOXS1O43638 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC15.1■□□□□ 0.01
FOXS1O43638 AC135586.1-201ENST00000539323 574 ntBASIC15.1■□□□□ 0.01
FOXS1O43638 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
FOXS1O43638 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
FOXS1O43638 AC010507.1-202ENST00000633286 381 ntTSL 3 BASIC15.1■□□□□ 0.01
FOXS1O43638 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
FOXS1O43638 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
FOXS1O43638 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
FOXS1O43638 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
FOXS1O43638 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
FOXS1O43638 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC15.1■□□□□ 0.01
FOXS1O43638 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
FOXS1O43638 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC15.1■□□□□ 0.01
FOXS1O43638 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
FOXS1O43638 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
FOXS1O43638 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
FOXS1O43638 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
FOXS1O43638 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
FOXS1O43638 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
FOXS1O43638 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
FOXS1O43638 LINC02447-202ENST00000501888 2146 ntBASIC15.1■□□□□ 0.01
FOXS1O43638 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
FOXS1O43638 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
FOXS1O43638 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC15.09■□□□□ 0.01
FOXS1O43638 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC15.09■□□□□ 0.01
FOXS1O43638 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
FOXS1O43638 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
FOXS1O43638 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC15.09■□□□□ 0.01
FOXS1O43638 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
FOXS1O43638 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
FOXS1O43638 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
FOXS1O43638 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
FOXS1O43638 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
FOXS1O43638 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
FOXS1O43638 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
FOXS1O43638 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC15.09■□□□□ 0.01
FOXS1O43638 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC15.09■□□□□ 0.01
FOXS1O43638 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC15.09■□□□□ 0.01
FOXS1O43638 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
FOXS1O43638 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
FOXS1O43638 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
FOXS1O43638 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC15.09■□□□□ 0.01
FOXS1O43638 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
FOXS1O43638 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC15.09■□□□□ 0.01
FOXS1O43638 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC15.09■□□□□ 0.01
FOXS1O43638 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC15.09■□□□□ 0.01
FOXS1O43638 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC15.09■□□□□ 0.01
FOXS1O43638 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
FOXS1O43638 SPDYE18-201ENST00000510091 1050 ntBASIC15.09■□□□□ 0.01
FOXS1O43638 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC15.09■□□□□ 0.01
FOXS1O43638 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC15.09■□□□□ 0.01
FOXS1O43638 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
FOXS1O43638 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC15.09■□□□□ 0.01
FOXS1O43638 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC15.09■□□□□ 0.01
FOXS1O43638 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC15.09■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms