Protein–RNA interactions for Protein: O14917

PCDH17, Protocadherin-17, humanhuman

Predictions only

Length 1,159 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH17O14917 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
PCDH17O14917 AC093512.1-201ENST00000617969 520 ntBASIC15.47■□□□□ 0.07
PCDH17O14917 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
PCDH17O14917 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
PCDH17O14917 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
PCDH17O14917 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
PCDH17O14917 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC15.47■□□□□ 0.07
PCDH17O14917 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC15.47■□□□□ 0.07
PCDH17O14917 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
PCDH17O14917 NFIC-211ENST00000641145 8399 ntBASIC15.47■□□□□ 0.07
PCDH17O14917 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
PCDH17O14917 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC15.47■□□□□ 0.07
PCDH17O14917 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC15.47■□□□□ 0.07
PCDH17O14917 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC15.47■□□□□ 0.07
PCDH17O14917 AL671710.1-201ENST00000610245 2349 ntBASIC15.46■□□□□ 0.07
PCDH17O14917 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
PCDH17O14917 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
PCDH17O14917 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
PCDH17O14917 MBP-202ENST00000355994 2772 ntTSL 5 BASIC15.46■□□□□ 0.07
PCDH17O14917 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC15.46■□□□□ 0.07
PCDH17O14917 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
PCDH17O14917 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
PCDH17O14917 VMO1-203ENST00000416307 712 ntTSL 2 BASIC15.46■□□□□ 0.07
PCDH17O14917 FAM58DP-201ENST00000428076 619 ntBASIC15.46■□□□□ 0.07
PCDH17O14917 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC15.46■□□□□ 0.07
PCDH17O14917 BCRP1-201ENST00000444246 691 ntBASIC15.46■□□□□ 0.07
PCDH17O14917 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC15.46■□□□□ 0.07
PCDH17O14917 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC15.46■□□□□ 0.07
PCDH17O14917 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC15.46■□□□□ 0.07
PCDH17O14917 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC15.46■□□□□ 0.07
PCDH17O14917 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC15.46■□□□□ 0.07
PCDH17O14917 AC010507.1-202ENST00000633286 381 ntTSL 3 BASIC15.46■□□□□ 0.07
PCDH17O14917 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
PCDH17O14917 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
PCDH17O14917 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.07
PCDH17O14917 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.07
PCDH17O14917 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC15.46■□□□□ 0.07
PCDH17O14917 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.06
PCDH17O14917 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC15.46■□□□□ 0.06
PCDH17O14917 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
PCDH17O14917 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.06
PCDH17O14917 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC15.46■□□□□ 0.06
PCDH17O14917 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC15.46■□□□□ 0.06
PCDH17O14917 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC15.45■□□□□ 0.06
PCDH17O14917 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC15.45■□□□□ 0.06
PCDH17O14917 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
PCDH17O14917 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC15.45■□□□□ 0.06
PCDH17O14917 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
PCDH17O14917 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
PCDH17O14917 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC15.45■□□□□ 0.06
PCDH17O14917 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
PCDH17O14917 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
PCDH17O14917 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC15.45■□□□□ 0.06
PCDH17O14917 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
PCDH17O14917 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC15.45■□□□□ 0.06
PCDH17O14917 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC15.45■□□□□ 0.06
PCDH17O14917 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
PCDH17O14917 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
PCDH17O14917 AC142381.1-201ENST00000426099 345 ntBASIC15.45■□□□□ 0.06
PCDH17O14917 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC15.45■□□□□ 0.06
PCDH17O14917 SLC25A39P2-201ENST00000537614 270 ntBASIC15.45■□□□□ 0.06
PCDH17O14917 VPS29-207ENST00000549970 818 ntTSL 3 BASIC15.45■□□□□ 0.06
PCDH17O14917 AC026150.2-201ENST00000564693 1156 ntBASIC15.45■□□□□ 0.06
PCDH17O14917 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC15.45■□□□□ 0.06
PCDH17O14917 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC15.45■□□□□ 0.06
PCDH17O14917 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
PCDH17O14917 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
PCDH17O14917 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC15.45■□□□□ 0.06
PCDH17O14917 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
PCDH17O14917 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
PCDH17O14917 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
PCDH17O14917 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC15.45■□□□□ 0.06
PCDH17O14917 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC15.45■□□□□ 0.06
PCDH17O14917 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
PCDH17O14917 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC15.45■□□□□ 0.06
PCDH17O14917 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC15.45■□□□□ 0.06
PCDH17O14917 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC15.45■□□□□ 0.06
PCDH17O14917 PKD1P5-201ENST00000532415 10291 ntBASIC15.45■□□□□ 0.06
PCDH17O14917 BANP-201ENST00000286122 2368 ntTSL 5 BASIC15.44■□□□□ 0.06
PCDH17O14917 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
PCDH17O14917 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC15.44■□□□□ 0.06
PCDH17O14917 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC15.44■□□□□ 0.06
PCDH17O14917 GGT3P-204ENST00000453783 1664 ntBASIC15.44■□□□□ 0.06
PCDH17O14917 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC15.44■□□□□ 0.06
PCDH17O14917 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC15.44■□□□□ 0.06
PCDH17O14917 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
PCDH17O14917 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC15.44■□□□□ 0.06
PCDH17O14917 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC15.44■□□□□ 0.06
PCDH17O14917 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC15.44■□□□□ 0.06
PCDH17O14917 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
PCDH17O14917 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
PCDH17O14917 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
PCDH17O14917 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC15.44■□□□□ 0.06
PCDH17O14917 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC15.44■□□□□ 0.06
PCDH17O14917 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
PCDH17O14917 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
PCDH17O14917 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC15.44■□□□□ 0.06
PCDH17O14917 CIB3-201ENST00000269878 711 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
PCDH17O14917 HLA-H-201ENST00000383620 1096 ntBASIC15.44■□□□□ 0.06
PCDH17O14917 AL035633.1-201ENST00000406139 838 ntBASIC15.44■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 78.8 ms