Protein–RNA interactions for Protein: O14562

UBFD1, Ubiquitin domain-containing protein UBFD1, humanhuman

Known RBP Predictions only

Length 309 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1O14562 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC15.67■□□□□ 0.1
UBFD1O14562 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC15.67■□□□□ 0.1
UBFD1O14562 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC15.67■□□□□ 0.1
UBFD1O14562 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC15.67■□□□□ 0.1
UBFD1O14562 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC15.67■□□□□ 0.1
UBFD1O14562 AC009090.5-201ENST00000624886 2285 ntBASIC15.67■□□□□ 0.1
UBFD1O14562 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
UBFD1O14562 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
UBFD1O14562 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC15.67■□□□□ 0.1
UBFD1O14562 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC15.67■□□□□ 0.1
UBFD1O14562 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
UBFD1O14562 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
UBFD1O14562 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
UBFD1O14562 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
UBFD1O14562 DMTN-202ENST00000358242 2772 ntTSL 5 BASIC15.67■□□□□ 0.1
UBFD1O14562 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC15.67■□□□□ 0.1
UBFD1O14562 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
UBFD1O14562 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
UBFD1O14562 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
UBFD1O14562 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC15.67■□□□□ 0.1
UBFD1O14562 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
UBFD1O14562 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
UBFD1O14562 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC15.67■□□□□ 0.1
UBFD1O14562 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
UBFD1O14562 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
UBFD1O14562 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
UBFD1O14562 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC15.66■□□□□ 0.1
UBFD1O14562 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
UBFD1O14562 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
UBFD1O14562 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
UBFD1O14562 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
UBFD1O14562 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
UBFD1O14562 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
UBFD1O14562 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
UBFD1O14562 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC15.66■□□□□ 0.1
UBFD1O14562 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC15.66■□□□□ 0.1
UBFD1O14562 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC15.66■□□□□ 0.1
UBFD1O14562 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC15.66■□□□□ 0.1
UBFD1O14562 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
UBFD1O14562 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
UBFD1O14562 AC007967.2-201ENST00000432613 625 ntBASIC15.66■□□□□ 0.1
UBFD1O14562 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC15.66■□□□□ 0.1
UBFD1O14562 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
UBFD1O14562 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC15.66■□□□□ 0.1
UBFD1O14562 AP002472.1-201ENST00000577490 586 ntBASIC15.66■□□□□ 0.1
UBFD1O14562 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
UBFD1O14562 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC15.66■□□□□ 0.1
UBFD1O14562 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
UBFD1O14562 FOXO1B-201ENST00000504678 1527 ntBASIC15.66■□□□□ 0.1
UBFD1O14562 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
UBFD1O14562 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
UBFD1O14562 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
UBFD1O14562 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
UBFD1O14562 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
UBFD1O14562 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
UBFD1O14562 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
UBFD1O14562 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
UBFD1O14562 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC15.66■□□□□ 0.1
UBFD1O14562 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
UBFD1O14562 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
UBFD1O14562 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
UBFD1O14562 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
UBFD1O14562 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
UBFD1O14562 AC087481.3-201ENST00000602886 1894 ntBASIC15.65■□□□□ 0.1
UBFD1O14562 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
UBFD1O14562 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
UBFD1O14562 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC15.65■□□□□ 0.1
UBFD1O14562 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
UBFD1O14562 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
UBFD1O14562 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
UBFD1O14562 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
UBFD1O14562 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC15.65■□□□□ 0.1
UBFD1O14562 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
UBFD1O14562 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
UBFD1O14562 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
UBFD1O14562 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC15.65■□□□□ 0.1
UBFD1O14562 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC15.65■□□□□ 0.1
UBFD1O14562 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC15.65■□□□□ 0.1
UBFD1O14562 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC15.65■□□□□ 0.1
UBFD1O14562 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC15.65■□□□□ 0.1
UBFD1O14562 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC15.65■□□□□ 0.1
UBFD1O14562 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC15.65■□□□□ 0.1
UBFD1O14562 AL513190.1-201ENST00000621254 727 ntBASIC15.65■□□□□ 0.1
UBFD1O14562 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC15.65■□□□□ 0.1
UBFD1O14562 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
UBFD1O14562 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
UBFD1O14562 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
UBFD1O14562 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
UBFD1O14562 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC15.65■□□□□ 0.1
UBFD1O14562 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
UBFD1O14562 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
UBFD1O14562 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
UBFD1O14562 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
UBFD1O14562 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
UBFD1O14562 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC15.64■□□□□ 0.1
UBFD1O14562 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
UBFD1O14562 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
UBFD1O14562 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
UBFD1O14562 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
UBFD1O14562 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 64.2 ms