Protein–RNA interactions for Protein: O00221

NFKBIE, NF-kappa-B inhibitor epsilon, humanhuman

Predictions only

Length 500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NFKBIEO00221 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
NFKBIEO00221 NEU3-206ENST00000532963 1643 ntTSL 2 BASIC19.12■□□□□ 0.65
NFKBIEO00221 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
NFKBIEO00221 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC19.12■□□□□ 0.65
NFKBIEO00221 ZNRD1-201ENST00000332435 864 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
NFKBIEO00221 CIDEC-201ENST00000336832 1277 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
NFKBIEO00221 NFYC-202ENST00000372651 1202 ntAPPRIS P3 TSL 5 BASIC19.12■□□□□ 0.65
NFKBIEO00221 FAM3B-203ENST00000398647 864 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
NFKBIEO00221 FAM3B-204ENST00000398652 1125 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
NFKBIEO00221 CIDEC-203ENST00000423850 1036 ntTSL 2 BASIC19.12■□□□□ 0.65
NFKBIEO00221 SIRPB2-203ENST00000444444 884 ntTSL 2 BASIC19.12■□□□□ 0.65
NFKBIEO00221 PENK-202ENST00000451791 1029 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
NFKBIEO00221 CIDEC-206ENST00000455015 1123 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
NFKBIEO00221 POU5F1P6-201ENST00000466990 990 ntBASIC19.12■□□□□ 0.65
NFKBIEO00221 AC044849.1-201ENST00000519737 1188 ntBASIC19.12■□□□□ 0.65
NFKBIEO00221 SDHD-202ENST00000525291 790 ntTSL 3 BASIC19.12■□□□□ 0.65
NFKBIEO00221 AC011495.3-201ENST00000596472 427 ntTSL 2 BASIC19.12■□□□□ 0.65
NFKBIEO00221 STPG3-204ENST00000611378 1015 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
NFKBIEO00221 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC19.12■□□□□ 0.65
NFKBIEO00221 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
NFKBIEO00221 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC19.12■□□□□ 0.65
NFKBIEO00221 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
NFKBIEO00221 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC19.12■□□□□ 0.65
NFKBIEO00221 AC134407.2-201ENST00000625089 1978 ntBASIC19.12■□□□□ 0.65
NFKBIEO00221 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
NFKBIEO00221 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
NFKBIEO00221 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
NFKBIEO00221 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
NFKBIEO00221 OS9-205ENST00000413095 1660 ntTSL 2 BASIC19.11■□□□□ 0.65
NFKBIEO00221 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
NFKBIEO00221 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
NFKBIEO00221 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
NFKBIEO00221 PDHB-206ENST00000474765 1503 ntTSL 5 BASIC19.11■□□□□ 0.65
NFKBIEO00221 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC19.11■□□□□ 0.65
NFKBIEO00221 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
NFKBIEO00221 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
NFKBIEO00221 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
NFKBIEO00221 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC19.11■□□□□ 0.65
NFKBIEO00221 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
NFKBIEO00221 EIF3G-201ENST00000253108 1103 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
NFKBIEO00221 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
NFKBIEO00221 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
NFKBIEO00221 GDAP1-202ENST00000434412 1228 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
NFKBIEO00221 AGTRAP-212ENST00000510878 849 ntTSL 3 BASIC19.11■□□□□ 0.65
NFKBIEO00221 AC005920.3-202ENST00000512717 789 ntTSL 3 BASIC19.11■□□□□ 0.65
NFKBIEO00221 FANCA-204ENST00000534992 1088 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
NFKBIEO00221 AP003419.2-201ENST00000543494 711 ntAPPRIS P1 TSL 3 BASIC19.11■□□□□ 0.65
NFKBIEO00221 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
NFKBIEO00221 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
NFKBIEO00221 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
NFKBIEO00221 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC19.11■□□□□ 0.65
NFKBIEO00221 SMPDL3A-201ENST00000368440 1851 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
NFKBIEO00221 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
NFKBIEO00221 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC19.11■□□□□ 0.65
NFKBIEO00221 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC19.11■□□□□ 0.65
NFKBIEO00221 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
NFKBIEO00221 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
NFKBIEO00221 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
NFKBIEO00221 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC19.1■□□□□ 0.65
NFKBIEO00221 CNBP-208ENST00000504813 1549 ntAPPRIS ALT1 TSL 2 BASIC19.1■□□□□ 0.65
NFKBIEO00221 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
NFKBIEO00221 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
NFKBIEO00221 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
NFKBIEO00221 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
NFKBIEO00221 AWAT1-201ENST00000374521 1365 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
NFKBIEO00221 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
NFKBIEO00221 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
NFKBIEO00221 BORCS5-201ENST00000298571 549 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
NFKBIEO00221 NDUFB8-201ENST00000299166 671 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
NFKBIEO00221 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
NFKBIEO00221 C15orf48-202ENST00000396650 732 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
NFKBIEO00221 LIMS4-201ENST00000413601 1215 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
NFKBIEO00221 AC134698.3-201ENST00000523880 214 ntBASIC19.1■□□□□ 0.65
NFKBIEO00221 FGFR3P5-201ENST00000564496 886 ntBASIC19.1■□□□□ 0.65
NFKBIEO00221 AC018635.2-201ENST00000608625 364 ntBASIC19.1■□□□□ 0.65
NFKBIEO00221 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC19.1■□□□□ 0.65
NFKBIEO00221 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
NFKBIEO00221 SLC39A6-202ENST00000440549 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
NFKBIEO00221 NOS2P2-202ENST00000639528 1659 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
NFKBIEO00221 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
NFKBIEO00221 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
NFKBIEO00221 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
NFKBIEO00221 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
NFKBIEO00221 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
NFKBIEO00221 HLA-A-202ENST00000376806 1854 ntBASIC19.09■□□□□ 0.65
NFKBIEO00221 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
NFKBIEO00221 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC19.09■□□□□ 0.65
NFKBIEO00221 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
NFKBIEO00221 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC19.09■□□□□ 0.65
NFKBIEO00221 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
NFKBIEO00221 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC19.09■□□□□ 0.65
NFKBIEO00221 RPP40-201ENST00000319533 1088 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
NFKBIEO00221 KCNAB2-207ENST00000378111 822 ntTSL 3 BASIC19.09■□□□□ 0.65
NFKBIEO00221 MIR769-201ENST00000390225 118 ntBASIC19.09■□□□□ 0.65
NFKBIEO00221 HCST-202ENST00000437550 445 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
NFKBIEO00221 IQCF3-203ENST00000444293 450 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
NFKBIEO00221 USE1-202ENST00000445667 795 ntAPPRIS ALT1 TSL 5 BASIC19.09■□□□□ 0.65
NFKBIEO00221 TCEAL4-208ENST00000472484 1273 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
NFKBIEO00221 COX5BP1-201ENST00000507622 393 ntBASIC19.09■□□□□ 0.65
NFKBIEO00221 AC124301.1-201ENST00000524885 602 ntTSL 3 BASIC19.09■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 48 ms