Protein–RNA interactions for Protein: H7C350

CCDC188, Coiled-coil domain-containing protein 188, humanhuman

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188H7C350 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CCDC188H7C350 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC16.81■□□□□ 0.28
CCDC188H7C350 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC16.81■□□□□ 0.28
CCDC188H7C350 TBCD-202ENST00000539345 3975 ntTSL 5 BASIC16.81■□□□□ 0.28
CCDC188H7C350 ROBO1-209ENST00000495273 5600 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
CCDC188H7C350 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CCDC188H7C350 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC16.81■□□□□ 0.28
CCDC188H7C350 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC16.81■□□□□ 0.28
CCDC188H7C350 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC16.81■□□□□ 0.28
CCDC188H7C350 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
CCDC188H7C350 ADARB2-203ENST00000381312 8421 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CCDC188H7C350 TPO-203ENST00000346956 2923 ntTSL 5 BASIC16.8■□□□□ 0.28
CCDC188H7C350 STOML1-204ENST00000541638 6336 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CCDC188H7C350 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
CCDC188H7C350 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CCDC188H7C350 SERPINA3-203ENST00000467132 2660 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
CCDC188H7C350 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CCDC188H7C350 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
CCDC188H7C350 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC16.8■□□□□ 0.28
CCDC188H7C350 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC16.8■□□□□ 0.28
CCDC188H7C350 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CCDC188H7C350 SAPCD2P3-201ENST00000455031 850 ntBASIC16.8■□□□□ 0.28
CCDC188H7C350 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC16.8■□□□□ 0.28
CCDC188H7C350 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CCDC188H7C350 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CCDC188H7C350 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
CCDC188H7C350 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CCDC188H7C350 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CCDC188H7C350 APPL1-201ENST00000288266 6058 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CCDC188H7C350 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC16.8■□□□□ 0.28
CCDC188H7C350 EPB41L3-206ENST00000544123 3972 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
CCDC188H7C350 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
CCDC188H7C350 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CCDC188H7C350 CICP24-201ENST00000605464 2705 ntBASIC16.8■□□□□ 0.28
CCDC188H7C350 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CCDC188H7C350 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
CCDC188H7C350 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC16.8■□□□□ 0.28
CCDC188H7C350 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
CCDC188H7C350 MOXD1-202ENST00000367963 3059 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CCDC188H7C350 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
CCDC188H7C350 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
CCDC188H7C350 GOLGA5-201ENST00000163416 2969 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CCDC188H7C350 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CCDC188H7C350 WASHC2C-208ENST00000537517 4417 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
CCDC188H7C350 POR-201ENST00000394893 2532 ntTSL 5 BASIC16.79■□□□□ 0.28
CCDC188H7C350 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC16.79■□□□□ 0.28
CCDC188H7C350 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CCDC188H7C350 MVK-207ENST00000539575 2747 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CCDC188H7C350 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC16.79■□□□□ 0.28
CCDC188H7C350 INPPL1-207ENST00000538751 4656 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CCDC188H7C350 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
CCDC188H7C350 KCTD15-201ENST00000284006 4918 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CCDC188H7C350 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC16.79■□□□□ 0.28
CCDC188H7C350 SLC5A7-201ENST00000264047 5152 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CCDC188H7C350 ST14-201ENST00000278742 3539 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CCDC188H7C350 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CCDC188H7C350 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
CCDC188H7C350 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
CCDC188H7C350 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC16.79■□□□□ 0.28
CCDC188H7C350 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC16.79■□□□□ 0.28
CCDC188H7C350 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
CCDC188H7C350 MIR3652-201ENST00000579335 131 ntBASIC16.79■□□□□ 0.28
CCDC188H7C350 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC16.79■□□□□ 0.28
CCDC188H7C350 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC16.79■□□□□ 0.28
CCDC188H7C350 ZNF334-202ENST00000457685 3487 ntTSL 2 BASIC16.79■□□□□ 0.28
CCDC188H7C350 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CCDC188H7C350 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC16.79■□□□□ 0.28
CCDC188H7C350 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC16.79■□□□□ 0.28
CCDC188H7C350 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CCDC188H7C350 WDR20-205ENST00000424963 2695 ntTSL 5 BASIC16.79■□□□□ 0.28
CCDC188H7C350 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC16.79■□□□□ 0.28
CCDC188H7C350 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CCDC188H7C350 CNGB1-201ENST00000251102 5641 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
CCDC188H7C350 C18orf15-201ENST00000623680 2534 ntBASIC16.78■□□□□ 0.28
CCDC188H7C350 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CCDC188H7C350 AC092127.1-201ENST00000567093 3455 ntBASIC16.78■□□□□ 0.28
CCDC188H7C350 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CCDC188H7C350 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC16.78■□□□□ 0.28
CCDC188H7C350 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CCDC188H7C350 PRKD2-201ENST00000291281 3070 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
CCDC188H7C350 AKR1C7P-201ENST00000305623 895 ntBASIC16.78■□□□□ 0.28
CCDC188H7C350 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CCDC188H7C350 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC16.78■□□□□ 0.28
CCDC188H7C350 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC16.78■□□□□ 0.28
CCDC188H7C350 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC16.78■□□□□ 0.28
CCDC188H7C350 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
CCDC188H7C350 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC16.78■□□□□ 0.28
CCDC188H7C350 RPS2P1-201ENST00000434010 821 ntBASIC16.78■□□□□ 0.28
CCDC188H7C350 CXCL1P1-201ENST00000502804 216 ntBASIC16.78■□□□□ 0.28
CCDC188H7C350 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC16.78■□□□□ 0.28
CCDC188H7C350 CFL1-202ENST00000524553 860 ntTSL 2 BASIC16.78■□□□□ 0.28
CCDC188H7C350 QPRT-203ENST00000562473 579 ntTSL 3 BASIC16.78■□□□□ 0.28
CCDC188H7C350 AC091304.2-201ENST00000564639 760 ntBASIC16.78■□□□□ 0.28
CCDC188H7C350 AL356488.2-201ENST00000602755 427 ntBASIC16.78■□□□□ 0.28
CCDC188H7C350 AC093458.2-201ENST00000623150 629 ntBASIC16.78■□□□□ 0.28
CCDC188H7C350 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC16.78■□□□□ 0.28
CCDC188H7C350 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CCDC188H7C350 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CCDC188H7C350 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
CCDC188H7C350 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 34.9 ms