Protein–RNA interactions for Protein: Q9Y5R8

TRAPPC1, Trafficking protein particle complex subunit 1, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1Q9Y5R8 RIC8B-202ENST00000392837 5135 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.44
TRAPPC1Q9Y5R8 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.44
TRAPPC1Q9Y5R8 AC090616.6-203ENST00000579186 1945 ntBASIC12.27□□□□□ -0.44
TRAPPC1Q9Y5R8 RPS6KA4-202ENST00000528057 3121 ntAPPRIS ALT1 TSL 1 (best) BASIC12.27□□□□□ -0.44
TRAPPC1Q9Y5R8 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC12.27□□□□□ -0.44
TRAPPC1Q9Y5R8 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
TRAPPC1Q9Y5R8 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC12.27□□□□□ -0.44
TRAPPC1Q9Y5R8 HEPACAM-201ENST00000298251 3602 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
TRAPPC1Q9Y5R8 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
TRAPPC1Q9Y5R8 ALDOA-203ENST00000395248 2447 ntTSL 5 BASIC12.27□□□□□ -0.44
TRAPPC1Q9Y5R8 SLC37A4-216ENST00000538950 2032 ntTSL 5 BASIC12.27□□□□□ -0.44
TRAPPC1Q9Y5R8 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC12.27□□□□□ -0.44
TRAPPC1Q9Y5R8 AC004223.3-201ENST00000593039 1638 ntAPPRIS P5 TSL 2 BASIC12.27□□□□□ -0.44
TRAPPC1Q9Y5R8 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
TRAPPC1Q9Y5R8 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
TRAPPC1Q9Y5R8 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
TRAPPC1Q9Y5R8 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
TRAPPC1Q9Y5R8 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
TRAPPC1Q9Y5R8 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
TRAPPC1Q9Y5R8 COL20A1-203ENST00000422202 8097 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.45
TRAPPC1Q9Y5R8 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
TRAPPC1Q9Y5R8 TSPY17P-201ENST00000450329 467 ntBASIC12.27□□□□□ -0.45
TRAPPC1Q9Y5R8 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
TRAPPC1Q9Y5R8 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC12.27□□□□□ -0.45
TRAPPC1Q9Y5R8 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
TRAPPC1Q9Y5R8 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.45
TRAPPC1Q9Y5R8 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC12.27□□□□□ -0.45
TRAPPC1Q9Y5R8 AL353719.1-201ENST00000566847 864 ntBASIC12.27□□□□□ -0.45
TRAPPC1Q9Y5R8 STK25P1-201ENST00000585406 838 ntBASIC12.27□□□□□ -0.45
TRAPPC1Q9Y5R8 TK1-205ENST00000590862 642 ntTSL 3 BASIC12.27□□□□□ -0.45
TRAPPC1Q9Y5R8 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC12.27□□□□□ -0.45
TRAPPC1Q9Y5R8 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC12.27□□□□□ -0.45
TRAPPC1Q9Y5R8 GXYLT1P4-201ENST00000613576 1192 ntBASIC12.27□□□□□ -0.45
TRAPPC1Q9Y5R8 AC004263.2-201ENST00000617183 678 ntBASIC12.27□□□□□ -0.45
TRAPPC1Q9Y5R8 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC12.27□□□□□ -0.45
TRAPPC1Q9Y5R8 ARHGEF17-201ENST00000263674 7853 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
TRAPPC1Q9Y5R8 FRMD8-202ENST00000355991 3514 ntTSL 2 BASIC12.27□□□□□ -0.45
TRAPPC1Q9Y5R8 CRLS1-201ENST00000378863 3958 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
TRAPPC1Q9Y5R8 PPFIA4-204ENST00000447715 6349 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
TRAPPC1Q9Y5R8 FGD6-203ENST00000546711 4568 ntTSL 5 BASIC12.27□□□□□ -0.45
TRAPPC1Q9Y5R8 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
TRAPPC1Q9Y5R8 PDE3B-202ENST00000455098 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
TRAPPC1Q9Y5R8 SLC4A11-202ENST00000380059 3229 ntAPPRIS ALT2 TSL 2 BASIC12.27□□□□□ -0.45
TRAPPC1Q9Y5R8 MBD1-201ENST00000269468 3259 ntAPPRIS P3 TSL 5 BASIC12.27□□□□□ -0.45
TRAPPC1Q9Y5R8 NMUR1-201ENST00000305141 3298 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
TRAPPC1Q9Y5R8 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC12.27□□□□□ -0.45
TRAPPC1Q9Y5R8 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC12.27□□□□□ -0.45
TRAPPC1Q9Y5R8 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC12.27□□□□□ -0.45
TRAPPC1Q9Y5R8 SPOCK3-210ENST00000506886 2947 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.45
TRAPPC1Q9Y5R8 A1CF-202ENST00000373993 1997 ntAPPRIS P4 TSL 1 (best) BASIC12.27□□□□□ -0.45
TRAPPC1Q9Y5R8 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC12.27□□□□□ -0.45
TRAPPC1Q9Y5R8 ZEB1-AS1-208ENST00000607166 2503 ntBASIC12.27□□□□□ -0.45
TRAPPC1Q9Y5R8 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.45
TRAPPC1Q9Y5R8 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
TRAPPC1Q9Y5R8 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC12.27□□□□□ -0.45
TRAPPC1Q9Y5R8 SFXN3-201ENST00000224807 3089 ntTSL 5 BASIC12.26□□□□□ -0.45
TRAPPC1Q9Y5R8 RFX2-222ENST00000592546 2578 ntAPPRIS ALT1 TSL 2 BASIC12.26□□□□□ -0.45
TRAPPC1Q9Y5R8 PCDHGA6-202ENST00000610583 5650 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
TRAPPC1Q9Y5R8 NTN4-201ENST00000343702 3615 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
TRAPPC1Q9Y5R8 TIMP2-201ENST00000262768 3652 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
TRAPPC1Q9Y5R8 DNM1-212ENST00000627543 4734 ntAPPRIS ALT1 TSL 5 BASIC12.26□□□□□ -0.45
TRAPPC1Q9Y5R8 CSNK1D-202ENST00000314028 3712 ntAPPRIS P4 TSL 1 (best) BASIC12.26□□□□□ -0.45
TRAPPC1Q9Y5R8 SSTR1-201ENST00000267377 4295 ntAPPRIS P1 TSL 2 BASIC12.26□□□□□ -0.45
TRAPPC1Q9Y5R8 BORCS5-202ENST00000314565 4840 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
TRAPPC1Q9Y5R8 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC12.26□□□□□ -0.45
TRAPPC1Q9Y5R8 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC12.26□□□□□ -0.45
TRAPPC1Q9Y5R8 PRR34-201ENST00000396008 2817 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
TRAPPC1Q9Y5R8 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
TRAPPC1Q9Y5R8 SLC26A11-201ENST00000361193 2885 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
TRAPPC1Q9Y5R8 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC12.26□□□□□ -0.45
TRAPPC1Q9Y5R8 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC12.26□□□□□ -0.45
TRAPPC1Q9Y5R8 AC140479.7-201ENST00000636301 2332 ntBASIC12.26□□□□□ -0.45
TRAPPC1Q9Y5R8 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
TRAPPC1Q9Y5R8 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
TRAPPC1Q9Y5R8 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
TRAPPC1Q9Y5R8 FAM219A-203ENST00000379080 3591 ntTSL 2 BASIC12.26□□□□□ -0.45
TRAPPC1Q9Y5R8 TFAM-204ENST00000487519 5414 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
TRAPPC1Q9Y5R8 EDEM3-202ENST00000367512 6678 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
TRAPPC1Q9Y5R8 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
TRAPPC1Q9Y5R8 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
TRAPPC1Q9Y5R8 DGKD-201ENST00000264057 6297 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
TRAPPC1Q9Y5R8 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC12.26□□□□□ -0.45
TRAPPC1Q9Y5R8 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC12.26□□□□□ -0.45
TRAPPC1Q9Y5R8 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
TRAPPC1Q9Y5R8 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
TRAPPC1Q9Y5R8 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
TRAPPC1Q9Y5R8 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
TRAPPC1Q9Y5R8 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC12.26□□□□□ -0.45
TRAPPC1Q9Y5R8 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
TRAPPC1Q9Y5R8 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
TRAPPC1Q9Y5R8 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC12.26□□□□□ -0.45
TRAPPC1Q9Y5R8 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
TRAPPC1Q9Y5R8 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
TRAPPC1Q9Y5R8 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
TRAPPC1Q9Y5R8 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
TRAPPC1Q9Y5R8 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
TRAPPC1Q9Y5R8 AC133681.1-201ENST00000465482 601 ntBASIC12.26□□□□□ -0.45
TRAPPC1Q9Y5R8 UNC93B5-201ENST00000530315 699 ntBASIC12.26□□□□□ -0.45
TRAPPC1Q9Y5R8 AC008403.3-201ENST00000598924 454 ntBASIC12.26□□□□□ -0.45
TRAPPC1Q9Y5R8 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC12.26□□□□□ -0.45
Retrieved 100 of 98,524 protein–RNA pairs in 51.4 ms