Protein–RNA interactions for Protein: Q9Y5G3

PCDHGB1, Protocadherin gamma-B1, humanhuman

Predictions only

Length 927 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB1Q9Y5G3 NCF1C-201ENST00000438382 1427 ntBASIC14.87□□□□□ -0.03
PCDHGB1Q9Y5G3 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
PCDHGB1Q9Y5G3 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC14.87□□□□□ -0.03
PCDHGB1Q9Y5G3 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC14.87□□□□□ -0.03
PCDHGB1Q9Y5G3 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC14.87□□□□□ -0.03
PCDHGB1Q9Y5G3 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC14.87□□□□□ -0.03
PCDHGB1Q9Y5G3 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC14.87□□□□□ -0.03
PCDHGB1Q9Y5G3 THAP5-204ENST00000438865 868 ntTSL 2 BASIC14.87□□□□□ -0.03
PCDHGB1Q9Y5G3 AP002383.4-201ENST00000442518 975 ntBASIC14.87□□□□□ -0.03
PCDHGB1Q9Y5G3 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC14.87□□□□□ -0.03
PCDHGB1Q9Y5G3 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC14.87□□□□□ -0.03
PCDHGB1Q9Y5G3 AC091167.2-201ENST00000579581 588 ntBASIC14.87□□□□□ -0.03
PCDHGB1Q9Y5G3 CYB561-217ENST00000582997 877 ntTSL 5 BASIC14.87□□□□□ -0.03
PCDHGB1Q9Y5G3 AL732292.2-201ENST00000609649 430 ntBASIC14.87□□□□□ -0.03
PCDHGB1Q9Y5G3 AC232323.1-201ENST00000540724 2099 ntBASIC14.87□□□□□ -0.03
PCDHGB1Q9Y5G3 REXO1L5P-201ENST00000622260 2098 ntBASIC14.87□□□□□ -0.03
PCDHGB1Q9Y5G3 ABCB9-216ENST00000542678 6051 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
PCDHGB1Q9Y5G3 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
PCDHGB1Q9Y5G3 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
PCDHGB1Q9Y5G3 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
PCDHGB1Q9Y5G3 AC013726.1-201ENST00000563747 2285 ntBASIC14.87□□□□□ -0.03
PCDHGB1Q9Y5G3 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
PCDHGB1Q9Y5G3 RPH3AL-201ENST00000323434 2809 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
PCDHGB1Q9Y5G3 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
PCDHGB1Q9Y5G3 API5-202ENST00000420461 2009 ntTSL 2 BASIC14.87□□□□□ -0.03
PCDHGB1Q9Y5G3 AL592424.1-201ENST00000563624 1536 ntBASIC14.87□□□□□ -0.03
PCDHGB1Q9Y5G3 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
PCDHGB1Q9Y5G3 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
PCDHGB1Q9Y5G3 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
PCDHGB1Q9Y5G3 TMPRSS3-204ENST00000433957 2403 ntAPPRIS ALT1 TSL 1 (best) BASIC14.86□□□□□ -0.03
PCDHGB1Q9Y5G3 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
PCDHGB1Q9Y5G3 TEAD3-201ENST00000338863 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
PCDHGB1Q9Y5G3 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC14.86□□□□□ -0.03
PCDHGB1Q9Y5G3 OPA1-208ENST00000392438 6340 ntAPPRIS ALT1 TSL 1 (best) BASIC14.86□□□□□ -0.03
PCDHGB1Q9Y5G3 CTNS-202ENST00000381870 2470 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
PCDHGB1Q9Y5G3 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC14.86□□□□□ -0.03
PCDHGB1Q9Y5G3 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC14.86□□□□□ -0.03
PCDHGB1Q9Y5G3 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC14.86□□□□□ -0.03
PCDHGB1Q9Y5G3 HPGD-202ENST00000296522 3027 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
PCDHGB1Q9Y5G3 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
PCDHGB1Q9Y5G3 PGBD5-201ENST00000391860 10961 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
PCDHGB1Q9Y5G3 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
PCDHGB1Q9Y5G3 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC14.86□□□□□ -0.03
PCDHGB1Q9Y5G3 TTLL13P-202ENST00000438251 2738 ntAPPRIS P5 TSL 5 BASIC14.86□□□□□ -0.03
PCDHGB1Q9Y5G3 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
PCDHGB1Q9Y5G3 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
PCDHGB1Q9Y5G3 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
PCDHGB1Q9Y5G3 WDR53-204ENST00000433160 887 ntTSL 5 BASIC14.86□□□□□ -0.03
PCDHGB1Q9Y5G3 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
PCDHGB1Q9Y5G3 AC079776.4-201ENST00000511039 504 ntBASIC14.86□□□□□ -0.03
PCDHGB1Q9Y5G3 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC14.86□□□□□ -0.03
PCDHGB1Q9Y5G3 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
PCDHGB1Q9Y5G3 HNRNPU-201ENST00000283179 3120 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
PCDHGB1Q9Y5G3 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
PCDHGB1Q9Y5G3 NIN-203ENST00000382041 6496 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
PCDHGB1Q9Y5G3 HYAL1-209ENST00000618175 2225 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
PCDHGB1Q9Y5G3 ITSN1-204ENST00000381285 6107 ntTSL 5 BASIC14.86□□□□□ -0.03
PCDHGB1Q9Y5G3 CEP78-203ENST00000376598 2404 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
PCDHGB1Q9Y5G3 CCDC50-201ENST00000392455 8429 ntAPPRIS ALT1 TSL 1 (best) BASIC14.86□□□□□ -0.03
PCDHGB1Q9Y5G3 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC14.86□□□□□ -0.03
PCDHGB1Q9Y5G3 PIK3CD-206ENST00000536656 5483 ntTSL 5 BASIC14.86□□□□□ -0.03
PCDHGB1Q9Y5G3 PIK3CD-208ENST00000628140 5483 ntTSL 5 BASIC14.86□□□□□ -0.03
PCDHGB1Q9Y5G3 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
PCDHGB1Q9Y5G3 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
PCDHGB1Q9Y5G3 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC14.86□□□□□ -0.03
PCDHGB1Q9Y5G3 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC14.86□□□□□ -0.03
PCDHGB1Q9Y5G3 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC14.86□□□□□ -0.03
PCDHGB1Q9Y5G3 PXN-221ENST00000637617 3246 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
PCDHGB1Q9Y5G3 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC14.86□□□□□ -0.03
PCDHGB1Q9Y5G3 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC14.86□□□□□ -0.03
PCDHGB1Q9Y5G3 MBD1-212ENST00000585672 2532 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
PCDHGB1Q9Y5G3 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
PCDHGB1Q9Y5G3 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
PCDHGB1Q9Y5G3 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
PCDHGB1Q9Y5G3 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
PCDHGB1Q9Y5G3 AAK1-202ENST00000409068 2606 ntTSL 2 BASIC14.85□□□□□ -0.03
PCDHGB1Q9Y5G3 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
PCDHGB1Q9Y5G3 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
PCDHGB1Q9Y5G3 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
PCDHGB1Q9Y5G3 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC14.85□□□□□ -0.03
PCDHGB1Q9Y5G3 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
PCDHGB1Q9Y5G3 GRIN3A-201ENST00000361820 7770 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
PCDHGB1Q9Y5G3 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
PCDHGB1Q9Y5G3 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
PCDHGB1Q9Y5G3 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
PCDHGB1Q9Y5G3 SEMA3G-201ENST00000231721 4899 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
PCDHGB1Q9Y5G3 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
PCDHGB1Q9Y5G3 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
PCDHGB1Q9Y5G3 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
PCDHGB1Q9Y5G3 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
PCDHGB1Q9Y5G3 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC14.85□□□□□ -0.03
PCDHGB1Q9Y5G3 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC14.85□□□□□ -0.03
PCDHGB1Q9Y5G3 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC14.85□□□□□ -0.03
PCDHGB1Q9Y5G3 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
PCDHGB1Q9Y5G3 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC14.85□□□□□ -0.03
PCDHGB1Q9Y5G3 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC14.85□□□□□ -0.03
PCDHGB1Q9Y5G3 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC14.85□□□□□ -0.03
PCDHGB1Q9Y5G3 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
PCDHGB1Q9Y5G3 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC14.85□□□□□ -0.03
PCDHGB1Q9Y5G3 TBCB-205ENST00000585746 875 ntTSL 3 BASIC14.85□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 50 ms