Protein–RNA interactions for Protein: Q9Y587

AP4S1, AP-4 complex subunit sigma-1, humanhuman

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4S1Q9Y587 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC15.33■□□□□ 0.04
AP4S1Q9Y587 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
AP4S1Q9Y587 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC15.33■□□□□ 0.04
AP4S1Q9Y587 RPS15-207ENST00000591032 550 ntTSL 3 BASIC15.33■□□□□ 0.04
AP4S1Q9Y587 RPS15-212ENST00000593052 629 ntTSL 2 BASIC15.33■□□□□ 0.04
AP4S1Q9Y587 PHF14-215ENST00000634607 3407 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
AP4S1Q9Y587 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
AP4S1Q9Y587 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
AP4S1Q9Y587 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC15.33■□□□□ 0.04
AP4S1Q9Y587 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC15.33■□□□□ 0.04
AP4S1Q9Y587 RCN2-203ENST00000394885 6347 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
AP4S1Q9Y587 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
AP4S1Q9Y587 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
AP4S1Q9Y587 CCDC22-201ENST00000376227 2319 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
AP4S1Q9Y587 CYP4F3-203ENST00000586182 2338 ntAPPRIS ALT1 TSL 2 BASIC15.33■□□□□ 0.04
AP4S1Q9Y587 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC15.33■□□□□ 0.04
AP4S1Q9Y587 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
AP4S1Q9Y587 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
AP4S1Q9Y587 PTPRO-201ENST00000281171 5301 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
AP4S1Q9Y587 MYH6-202ENST00000405093 5941 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
AP4S1Q9Y587 CCDC68-204ENST00000591504 4132 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
AP4S1Q9Y587 AC232323.1-201ENST00000540724 2099 ntBASIC15.32■□□□□ 0.04
AP4S1Q9Y587 REXO1L5P-201ENST00000622260 2098 ntBASIC15.32■□□□□ 0.04
AP4S1Q9Y587 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
AP4S1Q9Y587 TNFRSF11A-202ENST00000586569 8147 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
AP4S1Q9Y587 PITPNM3-201ENST00000262483 7086 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
AP4S1Q9Y587 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
AP4S1Q9Y587 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC15.32■□□□□ 0.04
AP4S1Q9Y587 AC013726.1-201ENST00000563747 2285 ntBASIC15.32■□□□□ 0.04
AP4S1Q9Y587 SPN-201ENST00000360121 6894 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
AP4S1Q9Y587 TERT-201ENST00000310581 4018 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
AP4S1Q9Y587 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
AP4S1Q9Y587 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
AP4S1Q9Y587 OPA1-203ENST00000361715 6384 ntTSL 5 BASIC15.32■□□□□ 0.04
AP4S1Q9Y587 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
AP4S1Q9Y587 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC15.32■□□□□ 0.04
AP4S1Q9Y587 GALNTL6-205ENST00000511251 2905 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
AP4S1Q9Y587 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
AP4S1Q9Y587 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
AP4S1Q9Y587 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC15.32■□□□□ 0.04
AP4S1Q9Y587 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC15.32■□□□□ 0.04
AP4S1Q9Y587 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
AP4S1Q9Y587 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
AP4S1Q9Y587 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
AP4S1Q9Y587 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
AP4S1Q9Y587 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
AP4S1Q9Y587 TLE1-202ENST00000376484 666 ntTSL 3 BASIC15.32■□□□□ 0.04
AP4S1Q9Y587 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
AP4S1Q9Y587 AL137013.1-201ENST00000432946 1228 ntBASIC15.32■□□□□ 0.04
AP4S1Q9Y587 AC092647.4-201ENST00000457211 535 ntBASIC15.32■□□□□ 0.04
AP4S1Q9Y587 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
AP4S1Q9Y587 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC15.32■□□□□ 0.04
AP4S1Q9Y587 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC15.32■□□□□ 0.04
AP4S1Q9Y587 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC15.32■□□□□ 0.04
AP4S1Q9Y587 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC15.32■□□□□ 0.04
AP4S1Q9Y587 LINC00552-201ENST00000625151 2579 ntBASIC15.32■□□□□ 0.04
AP4S1Q9Y587 CYB561-219ENST00000584031 3200 ntTSL 2 BASIC15.32■□□□□ 0.04
AP4S1Q9Y587 AC112693.3-201ENST00000624819 1983 ntBASIC15.32■□□□□ 0.04
AP4S1Q9Y587 SPTLC2-201ENST00000216484 8170 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
AP4S1Q9Y587 SLC40A1-201ENST00000261024 3442 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
AP4S1Q9Y587 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC15.32■□□□□ 0.04
AP4S1Q9Y587 ZNF18-201ENST00000322748 2767 ntAPPRIS P3 TSL 2 BASIC15.32■□□□□ 0.04
AP4S1Q9Y587 MSH5-203ENST00000375750 2775 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
AP4S1Q9Y587 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
AP4S1Q9Y587 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
AP4S1Q9Y587 NYAP1-201ENST00000300179 3581 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
AP4S1Q9Y587 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
AP4S1Q9Y587 CAPN7-201ENST00000253693 4353 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
AP4S1Q9Y587 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
AP4S1Q9Y587 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
AP4S1Q9Y587 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
AP4S1Q9Y587 FAM149A-202ENST00000356371 2997 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
AP4S1Q9Y587 PHTF1-202ENST00000369598 3000 ntTSL 5 BASIC15.32■□□□□ 0.04
AP4S1Q9Y587 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC15.32■□□□□ 0.04
AP4S1Q9Y587 KCNQ4-201ENST00000347132 4099 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
AP4S1Q9Y587 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC15.32■□□□□ 0.04
AP4S1Q9Y587 MAP3K1-201ENST00000399503 7011 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
AP4S1Q9Y587 CCP110-201ENST00000381396 5446 ntAPPRIS ALT1 TSL 1 (best) BASIC15.31■□□□□ 0.04
AP4S1Q9Y587 NWD2-201ENST00000309447 8325 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
AP4S1Q9Y587 STIP1-207ENST00000538945 1900 ntTSL 2 BASIC15.31■□□□□ 0.04
AP4S1Q9Y587 GPR137C-201ENST00000321662 3888 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
AP4S1Q9Y587 CTXND1-201ENST00000560778 6890 ntAPPRIS P1 TSL 3 BASIC15.31■□□□□ 0.04
AP4S1Q9Y587 AKAP7-204ENST00000431975 2954 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
AP4S1Q9Y587 TMEM41B-204ENST00000528080 3968 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
AP4S1Q9Y587 AL390755.1-201ENST00000623716 2027 ntBASIC15.31■□□□□ 0.04
AP4S1Q9Y587 SIDT1-201ENST00000264852 5080 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
AP4S1Q9Y587 PVR-203ENST00000403059 3078 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
AP4S1Q9Y587 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC15.31■□□□□ 0.04
AP4S1Q9Y587 ZFY-201ENST00000155093 5239 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
AP4S1Q9Y587 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC15.31■□□□□ 0.04
AP4S1Q9Y587 NEK5-204ENST00000617045 2127 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
AP4S1Q9Y587 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC15.31■□□□□ 0.04
AP4S1Q9Y587 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
AP4S1Q9Y587 BANP-203ENST00000393207 2438 ntTSL 2 BASIC15.31■□□□□ 0.04
AP4S1Q9Y587 NRG2-209ENST00000541337 3723 ntTSL 5 BASIC15.31■□□□□ 0.04
AP4S1Q9Y587 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
AP4S1Q9Y587 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
AP4S1Q9Y587 AMPD3-203ENST00000396554 3806 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
AP4S1Q9Y587 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC15.31■□□□□ 0.04
AP4S1Q9Y587 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 27.7 ms