Protein–RNA interactions for Protein: Q9UPQ7

PDZRN3, E3 ubiquitin-protein ligase PDZRN3, humanhuman

Predictions only

Length 1,066 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3Q9UPQ7 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
PDZRN3Q9UPQ7 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
PDZRN3Q9UPQ7 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC20.81■□□□□ 0.92
PDZRN3Q9UPQ7 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
PDZRN3Q9UPQ7 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
PDZRN3Q9UPQ7 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC20.8■□□□□ 0.92
PDZRN3Q9UPQ7 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
PDZRN3Q9UPQ7 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC20.8■□□□□ 0.92
PDZRN3Q9UPQ7 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
PDZRN3Q9UPQ7 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
PDZRN3Q9UPQ7 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
PDZRN3Q9UPQ7 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
PDZRN3Q9UPQ7 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
PDZRN3Q9UPQ7 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
PDZRN3Q9UPQ7 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC20.8■□□□□ 0.92
PDZRN3Q9UPQ7 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
PDZRN3Q9UPQ7 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC20.8■□□□□ 0.92
PDZRN3Q9UPQ7 AC140912.1-201ENST00000577171 1054 ntBASIC20.8■□□□□ 0.92
PDZRN3Q9UPQ7 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC20.8■□□□□ 0.92
PDZRN3Q9UPQ7 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC20.8■□□□□ 0.92
PDZRN3Q9UPQ7 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
PDZRN3Q9UPQ7 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
PDZRN3Q9UPQ7 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC20.8■□□□□ 0.92
PDZRN3Q9UPQ7 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
PDZRN3Q9UPQ7 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC20.8■□□□□ 0.92
PDZRN3Q9UPQ7 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC20.8■□□□□ 0.92
PDZRN3Q9UPQ7 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
PDZRN3Q9UPQ7 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
PDZRN3Q9UPQ7 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
PDZRN3Q9UPQ7 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
PDZRN3Q9UPQ7 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
PDZRN3Q9UPQ7 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
PDZRN3Q9UPQ7 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC20.79■□□□□ 0.92
PDZRN3Q9UPQ7 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
PDZRN3Q9UPQ7 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
PDZRN3Q9UPQ7 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC20.79■□□□□ 0.92
PDZRN3Q9UPQ7 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC20.79■□□□□ 0.92
PDZRN3Q9UPQ7 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
PDZRN3Q9UPQ7 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
PDZRN3Q9UPQ7 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC20.79■□□□□ 0.92
PDZRN3Q9UPQ7 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC20.79■□□□□ 0.92
PDZRN3Q9UPQ7 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
PDZRN3Q9UPQ7 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC20.79■□□□□ 0.92
PDZRN3Q9UPQ7 AL353705.2-201ENST00000428243 662 ntBASIC20.79■□□□□ 0.92
PDZRN3Q9UPQ7 AL357497.1-201ENST00000436249 666 ntTSL 3 BASIC20.79■□□□□ 0.92
PDZRN3Q9UPQ7 DICER1-AS1-202ENST00000439819 810 ntTSL 3 BASIC20.79■□□□□ 0.92
PDZRN3Q9UPQ7 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC20.79■□□□□ 0.92
PDZRN3Q9UPQ7 MRPS23-202ENST00000578444 580 ntTSL 2 BASIC20.79■□□□□ 0.92
PDZRN3Q9UPQ7 CYP2A7P1-201ENST00000595391 815 ntBASIC20.79■□□□□ 0.92
PDZRN3Q9UPQ7 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
PDZRN3Q9UPQ7 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
PDZRN3Q9UPQ7 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
PDZRN3Q9UPQ7 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC20.79■□□□□ 0.92
PDZRN3Q9UPQ7 AC024909.3-201ENST00000611513 2257 ntBASIC20.79■□□□□ 0.92
PDZRN3Q9UPQ7 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC20.79■□□□□ 0.92
PDZRN3Q9UPQ7 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC20.79■□□□□ 0.92
PDZRN3Q9UPQ7 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
PDZRN3Q9UPQ7 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC20.78■□□□□ 0.92
PDZRN3Q9UPQ7 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
PDZRN3Q9UPQ7 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC20.78■□□□□ 0.92
PDZRN3Q9UPQ7 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC20.78■□□□□ 0.92
PDZRN3Q9UPQ7 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC20.78■□□□□ 0.92
PDZRN3Q9UPQ7 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
PDZRN3Q9UPQ7 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
PDZRN3Q9UPQ7 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
PDZRN3Q9UPQ7 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
PDZRN3Q9UPQ7 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
PDZRN3Q9UPQ7 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
PDZRN3Q9UPQ7 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
PDZRN3Q9UPQ7 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
PDZRN3Q9UPQ7 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC20.78■□□□□ 0.92
PDZRN3Q9UPQ7 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
PDZRN3Q9UPQ7 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC20.78■□□□□ 0.92
PDZRN3Q9UPQ7 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
PDZRN3Q9UPQ7 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
PDZRN3Q9UPQ7 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC20.78■□□□□ 0.92
PDZRN3Q9UPQ7 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
PDZRN3Q9UPQ7 PHYHD1-202ENST00000353176 1374 ntTSL 5 BASIC20.78■□□□□ 0.92
PDZRN3Q9UPQ7 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC20.78■□□□□ 0.92
PDZRN3Q9UPQ7 AL391825.1-201ENST00000457671 1364 ntBASIC20.78■□□□□ 0.92
PDZRN3Q9UPQ7 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
PDZRN3Q9UPQ7 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
PDZRN3Q9UPQ7 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC20.78■□□□□ 0.92
PDZRN3Q9UPQ7 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
PDZRN3Q9UPQ7 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
PDZRN3Q9UPQ7 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC20.78■□□□□ 0.92
PDZRN3Q9UPQ7 AC068898.1-201ENST00000440750 335 ntTSL 3 BASIC20.78■□□□□ 0.92
PDZRN3Q9UPQ7 AC124944.1-201ENST00000448113 625 ntTSL 2 BASIC20.78■□□□□ 0.92
PDZRN3Q9UPQ7 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC20.78■□□□□ 0.92
PDZRN3Q9UPQ7 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
PDZRN3Q9UPQ7 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC20.78■□□□□ 0.92
PDZRN3Q9UPQ7 ATF7-204ENST00000548118 774 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
PDZRN3Q9UPQ7 AC009407.1-201ENST00000568958 598 ntBASIC20.78■□□□□ 0.92
PDZRN3Q9UPQ7 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC20.78■□□□□ 0.92
PDZRN3Q9UPQ7 SIGLEC29P-201ENST00000599873 1114 ntBASIC20.78■□□□□ 0.92
PDZRN3Q9UPQ7 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC20.78■□□□□ 0.92
PDZRN3Q9UPQ7 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
PDZRN3Q9UPQ7 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC20.78■□□□□ 0.92
PDZRN3Q9UPQ7 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
PDZRN3Q9UPQ7 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC20.78■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 32.7 ms