Protein–RNA interactions for Protein: Q9UN81

L1RE1, LINE-1 retrotransposable element ORF1 protein, humanhuman

Predictions only

Length 338 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
L1RE1Q9UN81 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
L1RE1Q9UN81 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
L1RE1Q9UN81 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
L1RE1Q9UN81 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
L1RE1Q9UN81 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC17.69■□□□□ 0.42
L1RE1Q9UN81 FAM45BP-202ENST00000592932 1624 ntBASIC17.69■□□□□ 0.42
L1RE1Q9UN81 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
L1RE1Q9UN81 ZNF30-202ENST00000439785 2651 ntAPPRIS P4 TSL 5 BASIC17.69■□□□□ 0.42
L1RE1Q9UN81 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
L1RE1Q9UN81 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC17.69■□□□□ 0.42
L1RE1Q9UN81 SUPT20HL2-201ENST00000486479 2409 ntBASIC17.69■□□□□ 0.42
L1RE1Q9UN81 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC17.69■□□□□ 0.42
L1RE1Q9UN81 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
L1RE1Q9UN81 CFLAR-204ENST00000341582 2056 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
L1RE1Q9UN81 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
L1RE1Q9UN81 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
L1RE1Q9UN81 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
L1RE1Q9UN81 CASK-202ENST00000378158 3848 ntTSL 5 BASIC17.69■□□□□ 0.42
L1RE1Q9UN81 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC17.69■□□□□ 0.42
L1RE1Q9UN81 GPS2P2-201ENST00000430745 888 ntBASIC17.69■□□□□ 0.42
L1RE1Q9UN81 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC17.69■□□□□ 0.42
L1RE1Q9UN81 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC17.69■□□□□ 0.42
L1RE1Q9UN81 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC17.69■□□□□ 0.42
L1RE1Q9UN81 HLA-J-203ENST00000494367 1087 ntBASIC17.69■□□□□ 0.42
L1RE1Q9UN81 AC109322.1-201ENST00000524499 1264 ntBASIC17.69■□□□□ 0.42
L1RE1Q9UN81 DAD1-205ENST00000543337 501 ntTSL 3 BASIC17.69■□□□□ 0.42
L1RE1Q9UN81 AP000842.3-202ENST00000569238 1080 ntBASIC17.69■□□□□ 0.42
L1RE1Q9UN81 AC093028.1-201ENST00000622998 982 ntBASIC17.69■□□□□ 0.42
L1RE1Q9UN81 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC17.69■□□□□ 0.42
L1RE1Q9UN81 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
L1RE1Q9UN81 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC17.69■□□□□ 0.42
L1RE1Q9UN81 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
L1RE1Q9UN81 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
L1RE1Q9UN81 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC17.69■□□□□ 0.42
L1RE1Q9UN81 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
L1RE1Q9UN81 SOWAHA-201ENST00000378693 3211 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
L1RE1Q9UN81 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
L1RE1Q9UN81 ZNF212-201ENST00000335870 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
L1RE1Q9UN81 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC17.69■□□□□ 0.42
L1RE1Q9UN81 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
L1RE1Q9UN81 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC17.69■□□□□ 0.42
L1RE1Q9UN81 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
L1RE1Q9UN81 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
L1RE1Q9UN81 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
L1RE1Q9UN81 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
L1RE1Q9UN81 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC17.69■□□□□ 0.42
L1RE1Q9UN81 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC17.69■□□□□ 0.42
L1RE1Q9UN81 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC17.68■□□□□ 0.42
L1RE1Q9UN81 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
L1RE1Q9UN81 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
L1RE1Q9UN81 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC17.68■□□□□ 0.42
L1RE1Q9UN81 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
L1RE1Q9UN81 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
L1RE1Q9UN81 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC17.68■□□□□ 0.42
L1RE1Q9UN81 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
L1RE1Q9UN81 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC17.68■□□□□ 0.42
L1RE1Q9UN81 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
L1RE1Q9UN81 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
L1RE1Q9UN81 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
L1RE1Q9UN81 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC17.68■□□□□ 0.42
L1RE1Q9UN81 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC17.68■□□□□ 0.42
L1RE1Q9UN81 ZNF367-201ENST00000375256 3646 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
L1RE1Q9UN81 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
L1RE1Q9UN81 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
L1RE1Q9UN81 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
L1RE1Q9UN81 MIR346-201ENST00000362234 95 ntBASIC17.68■□□□□ 0.42
L1RE1Q9UN81 PTMS-202ENST00000389462 773 ntTSL 2 BASIC17.68■□□□□ 0.42
L1RE1Q9UN81 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
L1RE1Q9UN81 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC17.68■□□□□ 0.42
L1RE1Q9UN81 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
L1RE1Q9UN81 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC17.68■□□□□ 0.42
L1RE1Q9UN81 SYBU-208ENST00000440310 3072 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
L1RE1Q9UN81 SLC25A39P2-201ENST00000537614 270 ntBASIC17.68■□□□□ 0.42
L1RE1Q9UN81 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC17.68■□□□□ 0.42
L1RE1Q9UN81 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
L1RE1Q9UN81 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC17.68■□□□□ 0.42
L1RE1Q9UN81 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC17.68■□□□□ 0.42
L1RE1Q9UN81 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC17.68■□□□□ 0.42
L1RE1Q9UN81 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC17.68■□□□□ 0.42
L1RE1Q9UN81 NKG7-205ENST00000600427 520 ntTSL 3 BASIC17.68■□□□□ 0.42
L1RE1Q9UN81 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC17.68■□□□□ 0.42
L1RE1Q9UN81 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC17.68■□□□□ 0.42
L1RE1Q9UN81 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC17.68■□□□□ 0.42
L1RE1Q9UN81 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC17.68■□□□□ 0.42
L1RE1Q9UN81 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC17.68■□□□□ 0.42
L1RE1Q9UN81 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
L1RE1Q9UN81 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
L1RE1Q9UN81 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC17.68■□□□□ 0.42
L1RE1Q9UN81 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
L1RE1Q9UN81 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC17.68■□□□□ 0.42
L1RE1Q9UN81 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
L1RE1Q9UN81 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
L1RE1Q9UN81 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
L1RE1Q9UN81 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
L1RE1Q9UN81 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC17.67■□□□□ 0.42
L1RE1Q9UN81 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
L1RE1Q9UN81 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
L1RE1Q9UN81 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC17.67■□□□□ 0.42
L1RE1Q9UN81 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
L1RE1Q9UN81 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC17.67■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 37.5 ms