Protein–RNA interactions for Protein: Q9HCK8

CHD8, Chromodomain-helicase-DNA-binding protein 8, humanhuman

Predictions only

Length 2,581 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8Q9HCK8 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC14.69□□□□□ -0.06
CHD8Q9HCK8 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CHD8Q9HCK8 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
CHD8Q9HCK8 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CHD8Q9HCK8 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CHD8Q9HCK8 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
CHD8Q9HCK8 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC14.69□□□□□ -0.06
CHD8Q9HCK8 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC14.69□□□□□ -0.06
CHD8Q9HCK8 CTSL-202ENST00000342020 933 ntTSL 2 BASIC14.69□□□□□ -0.06
CHD8Q9HCK8 CMTM5-203ENST00000359320 1200 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CHD8Q9HCK8 FAM27C-201ENST00000377542 616 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
CHD8Q9HCK8 IQCF3-203ENST00000444293 450 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
CHD8Q9HCK8 AL353637.1-201ENST00000451571 732 ntBASIC14.69□□□□□ -0.06
CHD8Q9HCK8 KRT18P43-201ENST00000469825 1281 ntBASIC14.69□□□□□ -0.06
CHD8Q9HCK8 MARK2P5-201ENST00000507649 634 ntBASIC14.69□□□□□ -0.06
CHD8Q9HCK8 ZNF879-202ENST00000519896 543 ntTSL 4 BASIC14.69□□□□□ -0.06
CHD8Q9HCK8 AC012158.2-201ENST00000536546 354 ntBASIC14.69□□□□□ -0.06
CHD8Q9HCK8 RPL19-207ENST00000582193 792 ntAPPRIS ALT1 TSL 5 BASIC14.69□□□□□ -0.06
CHD8Q9HCK8 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC14.69□□□□□ -0.06
CHD8Q9HCK8 AL138720.1-201ENST00000629853 778 ntTSL 5 BASIC14.69□□□□□ -0.06
CHD8Q9HCK8 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CHD8Q9HCK8 C20orf202-201ENST00000400633 1604 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CHD8Q9HCK8 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC14.69□□□□□ -0.06
CHD8Q9HCK8 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CHD8Q9HCK8 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CHD8Q9HCK8 AC106820.2-201ENST00000563775 3264 ntBASIC14.69□□□□□ -0.06
CHD8Q9HCK8 TXNDC5-204ENST00000473453 1301 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
CHD8Q9HCK8 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CHD8Q9HCK8 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
CHD8Q9HCK8 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC14.68□□□□□ -0.06
CHD8Q9HCK8 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
CHD8Q9HCK8 FETUB-207ENST00000450521 1410 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CHD8Q9HCK8 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
CHD8Q9HCK8 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
CHD8Q9HCK8 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC14.68□□□□□ -0.06
CHD8Q9HCK8 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CHD8Q9HCK8 AC074338.1-201ENST00000416825 156 ntBASIC14.68□□□□□ -0.06
CHD8Q9HCK8 PRKAR2A-AS1-203ENST00000431705 592 ntTSL 4 BASIC14.68□□□□□ -0.06
CHD8Q9HCK8 PABPC5-AS1-201ENST00000456187 426 ntTSL 5 BASIC14.68□□□□□ -0.06
CHD8Q9HCK8 LINC02332-201ENST00000557232 386 ntTSL 3 BASIC14.68□□□□□ -0.06
CHD8Q9HCK8 AC242376.1-201ENST00000559033 726 ntBASIC14.68□□□□□ -0.06
CHD8Q9HCK8 AC079336.4-201ENST00000584219 408 ntTSL 2 BASIC14.68□□□□□ -0.06
CHD8Q9HCK8 AC011479.1-202ENST00000591889 528 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
CHD8Q9HCK8 DDX5-235ENST00000630471 473 ntTSL 4 BASIC14.68□□□□□ -0.06
CHD8Q9HCK8 MBD3L2B-202ENST00000637800 774 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CHD8Q9HCK8 PCDHB17P-201ENST00000539533 2393 ntBASIC14.68□□□□□ -0.06
CHD8Q9HCK8 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CHD8Q9HCK8 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
CHD8Q9HCK8 CSF3-201ENST00000225474 1509 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
CHD8Q9HCK8 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
CHD8Q9HCK8 FST-202ENST00000396947 2538 ntTSL 5 BASIC14.68□□□□□ -0.06
CHD8Q9HCK8 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC14.68□□□□□ -0.06
CHD8Q9HCK8 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC14.68□□□□□ -0.06
CHD8Q9HCK8 SLC25A19-205ENST00000442286 1496 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
CHD8Q9HCK8 CMA1-202ENST00000250378 937 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CHD8Q9HCK8 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC14.68□□□□□ -0.06
CHD8Q9HCK8 RPAIN-201ENST00000327154 815 ntTSL 2 BASIC14.68□□□□□ -0.06
CHD8Q9HCK8 CALCA-201ENST00000331587 843 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
CHD8Q9HCK8 TREX1-202ENST00000444177 1200 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
CHD8Q9HCK8 KRT16P3-202ENST00000580113 1012 ntTSL 3 BASIC14.68□□□□□ -0.06
CHD8Q9HCK8 KRT16P1-203ENST00000581027 1012 ntTSL 5 BASIC14.68□□□□□ -0.06
CHD8Q9HCK8 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
CHD8Q9HCK8 GHRHR-212ENST00000611037 923 ntTSL 5 BASIC14.68□□□□□ -0.06
CHD8Q9HCK8 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
CHD8Q9HCK8 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC14.68□□□□□ -0.06
CHD8Q9HCK8 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
CHD8Q9HCK8 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
CHD8Q9HCK8 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CHD8Q9HCK8 MRPS7-201ENST00000245539 1406 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CHD8Q9HCK8 CDC45-202ENST00000404724 1693 ntTSL 2 BASIC14.67□□□□□ -0.06
CHD8Q9HCK8 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CHD8Q9HCK8 NUP210P1-201ENST00000357061 876 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
CHD8Q9HCK8 UROS-201ENST00000368774 744 ntTSL 2 BASIC14.67□□□□□ -0.06
CHD8Q9HCK8 CNRIP1-202ENST00000409559 644 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
CHD8Q9HCK8 AC000095.1-201ENST00000603208 874 ntBASIC14.67□□□□□ -0.06
CHD8Q9HCK8 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC14.67□□□□□ -0.06
CHD8Q9HCK8 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC14.67□□□□□ -0.06
CHD8Q9HCK8 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CHD8Q9HCK8 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
CHD8Q9HCK8 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CHD8Q9HCK8 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
CHD8Q9HCK8 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC14.67□□□□□ -0.06
CHD8Q9HCK8 AL512652.2-201ENST00000625156 1716 ntBASIC14.67□□□□□ -0.06
CHD8Q9HCK8 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
CHD8Q9HCK8 ACTA1-202ENST00000366684 1491 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CHD8Q9HCK8 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CHD8Q9HCK8 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
CHD8Q9HCK8 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
CHD8Q9HCK8 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
CHD8Q9HCK8 OR9I1-201ENST00000302610 945 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
CHD8Q9HCK8 C1orf53-201ENST00000367393 588 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CHD8Q9HCK8 PHACTR1-203ENST00000379335 943 ntTSL 2 BASIC14.67□□□□□ -0.06
CHD8Q9HCK8 TUBB8P8-201ENST00000458717 1058 ntBASIC14.67□□□□□ -0.06
CHD8Q9HCK8 FOS-204ENST00000554617 796 ntTSL 2 BASIC14.67□□□□□ -0.06
CHD8Q9HCK8 EID1-202ENST00000560490 584 ntTSL 3 BASIC14.67□□□□□ -0.06
CHD8Q9HCK8 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
CHD8Q9HCK8 GGT4P-201ENST00000623672 1708 ntBASIC14.66□□□□□ -0.06
CHD8Q9HCK8 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
CHD8Q9HCK8 GPAA1P2-202ENST00000606848 1787 ntBASIC14.66□□□□□ -0.06
CHD8Q9HCK8 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC14.66□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 40.7 ms