Protein–RNA interactions for Protein: Q9C0C9

UBE2O, (E3-independent) E2 ubiquitin-conjugating enzyme, humanhuman

Known RBP Predictions only

Length 1,292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2OQ9C0C9 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
UBE2OQ9C0C9 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
UBE2OQ9C0C9 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC17.75■□□□□ 0.43
UBE2OQ9C0C9 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC17.75■□□□□ 0.43
UBE2OQ9C0C9 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC17.75■□□□□ 0.43
UBE2OQ9C0C9 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
UBE2OQ9C0C9 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC17.75■□□□□ 0.43
UBE2OQ9C0C9 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
UBE2OQ9C0C9 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
UBE2OQ9C0C9 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
UBE2OQ9C0C9 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
UBE2OQ9C0C9 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
UBE2OQ9C0C9 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
UBE2OQ9C0C9 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
UBE2OQ9C0C9 DUSP13-202ENST00000372700 781 ntTSL 3 BASIC17.75■□□□□ 0.43
UBE2OQ9C0C9 APOA1-205ENST00000375329 927 ntTSL 2 BASIC17.75■□□□□ 0.43
UBE2OQ9C0C9 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
UBE2OQ9C0C9 FXNP2-201ENST00000411625 547 ntBASIC17.75■□□□□ 0.43
UBE2OQ9C0C9 RPL28-203ENST00000428193 573 ntTSL 2 BASIC17.75■□□□□ 0.43
UBE2OQ9C0C9 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC17.75■□□□□ 0.43
UBE2OQ9C0C9 AP001258.2-201ENST00000529891 490 ntBASIC17.75■□□□□ 0.43
UBE2OQ9C0C9 TP53AIP1-205ENST00000531399 806 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
UBE2OQ9C0C9 AL583722.2-201ENST00000557223 663 ntTSL 3 BASIC17.75■□□□□ 0.43
UBE2OQ9C0C9 RPL28-207ENST00000558815 616 ntTSL 2 BASIC17.75■□□□□ 0.43
UBE2OQ9C0C9 RN7SL560P-201ENST00000577943 264 ntBASIC17.75■□□□□ 0.43
UBE2OQ9C0C9 TUBB6-203ENST00000586653 788 ntTSL 2 BASIC17.75■□□□□ 0.43
UBE2OQ9C0C9 AC016629.1-201ENST00000596579 586 ntBASIC17.75■□□□□ 0.43
UBE2OQ9C0C9 AC074044.1-201ENST00000609673 707 ntBASIC17.75■□□□□ 0.43
UBE2OQ9C0C9 FP565260.6-205ENST00000624120 898 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
UBE2OQ9C0C9 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
UBE2OQ9C0C9 FRMD8P1-201ENST00000440433 1524 ntBASIC17.75■□□□□ 0.43
UBE2OQ9C0C9 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
UBE2OQ9C0C9 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
UBE2OQ9C0C9 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
UBE2OQ9C0C9 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
UBE2OQ9C0C9 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
UBE2OQ9C0C9 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC17.75■□□□□ 0.43
UBE2OQ9C0C9 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
UBE2OQ9C0C9 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
UBE2OQ9C0C9 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
UBE2OQ9C0C9 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
UBE2OQ9C0C9 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC17.74■□□□□ 0.43
UBE2OQ9C0C9 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC17.74■□□□□ 0.43
UBE2OQ9C0C9 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
UBE2OQ9C0C9 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
UBE2OQ9C0C9 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
UBE2OQ9C0C9 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
UBE2OQ9C0C9 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC17.74■□□□□ 0.43
UBE2OQ9C0C9 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
UBE2OQ9C0C9 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
UBE2OQ9C0C9 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
UBE2OQ9C0C9 PQBP1-201ENST00000218224 1113 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
UBE2OQ9C0C9 PQBP1-202ENST00000247140 664 ntTSL 3 BASIC17.74■□□□□ 0.43
UBE2OQ9C0C9 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
UBE2OQ9C0C9 PQBP1-203ENST00000376563 1056 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
UBE2OQ9C0C9 PQBP1-204ENST00000376566 760 ntTSL 3 BASIC17.74■□□□□ 0.43
UBE2OQ9C0C9 PQBP1-205ENST00000396763 965 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
UBE2OQ9C0C9 AL121983.1-201ENST00000424181 335 ntTSL 2 BASIC17.74■□□□□ 0.43
UBE2OQ9C0C9 KLK4-202ENST00000431178 481 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
UBE2OQ9C0C9 WDR53-204ENST00000433160 887 ntTSL 5 BASIC17.74■□□□□ 0.43
UBE2OQ9C0C9 PQBP1-207ENST00000447146 1020 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
UBE2OQ9C0C9 AC090099.4-201ENST00000527671 1027 ntTSL 5 BASIC17.74■□□□□ 0.43
UBE2OQ9C0C9 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
UBE2OQ9C0C9 AP000812.2-201ENST00000538934 718 ntBASIC17.74■□□□□ 0.43
UBE2OQ9C0C9 AC012568.1-201ENST00000558463 472 ntTSL 2 BASIC17.74■□□□□ 0.43
UBE2OQ9C0C9 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC17.74■□□□□ 0.43
UBE2OQ9C0C9 FBXL12-211ENST00000591009 1005 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
UBE2OQ9C0C9 SCGB1C2-201ENST00000595228 478 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
UBE2OQ9C0C9 RPS5-209ENST00000601521 1203 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
UBE2OQ9C0C9 AL022328.3-201ENST00000607943 679 ntBASIC17.74■□□□□ 0.43
UBE2OQ9C0C9 AC020765.3-201ENST00000613051 740 ntBASIC17.74■□□□□ 0.43
UBE2OQ9C0C9 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
UBE2OQ9C0C9 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
UBE2OQ9C0C9 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
UBE2OQ9C0C9 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
UBE2OQ9C0C9 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
UBE2OQ9C0C9 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
UBE2OQ9C0C9 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
UBE2OQ9C0C9 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
UBE2OQ9C0C9 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
UBE2OQ9C0C9 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
UBE2OQ9C0C9 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC17.73■□□□□ 0.43
UBE2OQ9C0C9 LINC02012-201ENST00000608206 1725 ntBASIC17.73■□□□□ 0.43
UBE2OQ9C0C9 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
UBE2OQ9C0C9 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
UBE2OQ9C0C9 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
UBE2OQ9C0C9 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
UBE2OQ9C0C9 NINJ2-201ENST00000305108 1252 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
UBE2OQ9C0C9 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
UBE2OQ9C0C9 APOA1-204ENST00000375323 1088 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
UBE2OQ9C0C9 KNCN-202ENST00000396314 608 ntAPPRIS P3 TSL 4 BASIC17.73■□□□□ 0.43
UBE2OQ9C0C9 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC17.73■□□□□ 0.43
UBE2OQ9C0C9 AC083949.1-201ENST00000422013 657 ntTSL 3 BASIC17.73■□□□□ 0.43
UBE2OQ9C0C9 AC006003.1-201ENST00000448541 613 ntTSL 4 BASIC17.73■□□□□ 0.43
UBE2OQ9C0C9 AC083949.1-202ENST00000458490 552 ntTSL 3 BASIC17.73■□□□□ 0.43
UBE2OQ9C0C9 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
UBE2OQ9C0C9 LYRM4-206ENST00000468929 1168 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
UBE2OQ9C0C9 HNRNPA1P13-201ENST00000510646 963 ntBASIC17.73■□□□□ 0.43
UBE2OQ9C0C9 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC17.73■□□□□ 0.43
UBE2OQ9C0C9 RMDN1-212ENST00000519966 1164 ntTSL 2 BASIC17.73■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 55.4 ms