Protein–RNA interactions for Protein: Q9BSR8

YIPF4, Protein YIPF4, humanhuman

Predictions only

Length 244 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF4Q9BSR8 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
YIPF4Q9BSR8 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
YIPF4Q9BSR8 AC073439.1-201ENST00000624121 1774 ntBASIC15.27■□□□□ 0.04
YIPF4Q9BSR8 POLI-208ENST00000579534 6133 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
YIPF4Q9BSR8 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
YIPF4Q9BSR8 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
YIPF4Q9BSR8 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
YIPF4Q9BSR8 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
YIPF4Q9BSR8 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
YIPF4Q9BSR8 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
YIPF4Q9BSR8 AC211486.1-202ENST00000416371 468 ntBASIC15.27■□□□□ 0.04
YIPF4Q9BSR8 PMS2P2-201ENST00000425039 1128 ntBASIC15.27■□□□□ 0.04
YIPF4Q9BSR8 AC211476.1-201ENST00000503899 468 ntBASIC15.27■□□□□ 0.04
YIPF4Q9BSR8 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC15.27■□□□□ 0.04
YIPF4Q9BSR8 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC15.27■□□□□ 0.04
YIPF4Q9BSR8 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC15.27■□□□□ 0.04
YIPF4Q9BSR8 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC15.27■□□□□ 0.04
YIPF4Q9BSR8 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC15.27■□□□□ 0.04
YIPF4Q9BSR8 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC15.27■□□□□ 0.04
YIPF4Q9BSR8 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
YIPF4Q9BSR8 NARF-206ENST00000457415 1668 ntTSL 5 BASIC15.27■□□□□ 0.03
YIPF4Q9BSR8 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.03
YIPF4Q9BSR8 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC15.27■□□□□ 0.03
YIPF4Q9BSR8 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC15.27■□□□□ 0.03
YIPF4Q9BSR8 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC15.27■□□□□ 0.03
YIPF4Q9BSR8 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
YIPF4Q9BSR8 PDE3A-201ENST00000359062 7576 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
YIPF4Q9BSR8 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC15.27■□□□□ 0.03
YIPF4Q9BSR8 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
YIPF4Q9BSR8 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
YIPF4Q9BSR8 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.03
YIPF4Q9BSR8 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
YIPF4Q9BSR8 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC15.27■□□□□ 0.03
YIPF4Q9BSR8 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
YIPF4Q9BSR8 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
YIPF4Q9BSR8 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
YIPF4Q9BSR8 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
YIPF4Q9BSR8 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC15.27■□□□□ 0.03
YIPF4Q9BSR8 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
YIPF4Q9BSR8 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC15.26■□□□□ 0.03
YIPF4Q9BSR8 NIN-203ENST00000382041 6496 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
YIPF4Q9BSR8 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC15.26■□□□□ 0.03
YIPF4Q9BSR8 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
YIPF4Q9BSR8 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
YIPF4Q9BSR8 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
YIPF4Q9BSR8 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC15.26■□□□□ 0.03
YIPF4Q9BSR8 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
YIPF4Q9BSR8 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC15.26■□□□□ 0.03
YIPF4Q9BSR8 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
YIPF4Q9BSR8 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC15.26■□□□□ 0.03
YIPF4Q9BSR8 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
YIPF4Q9BSR8 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC15.26■□□□□ 0.03
YIPF4Q9BSR8 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
YIPF4Q9BSR8 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
YIPF4Q9BSR8 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
YIPF4Q9BSR8 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC15.26■□□□□ 0.03
YIPF4Q9BSR8 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
YIPF4Q9BSR8 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
YIPF4Q9BSR8 GGCT-205ENST00000409436 954 ntTSL 3 BASIC15.26■□□□□ 0.03
YIPF4Q9BSR8 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC15.26■□□□□ 0.03
YIPF4Q9BSR8 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC15.26■□□□□ 0.03
YIPF4Q9BSR8 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC15.26■□□□□ 0.03
YIPF4Q9BSR8 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC15.26■□□□□ 0.03
YIPF4Q9BSR8 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
YIPF4Q9BSR8 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
YIPF4Q9BSR8 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
YIPF4Q9BSR8 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
YIPF4Q9BSR8 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
YIPF4Q9BSR8 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
YIPF4Q9BSR8 LINC02447-202ENST00000501888 2146 ntBASIC15.26■□□□□ 0.03
YIPF4Q9BSR8 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC15.26■□□□□ 0.03
YIPF4Q9BSR8 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
YIPF4Q9BSR8 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC15.26■□□□□ 0.03
YIPF4Q9BSR8 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
YIPF4Q9BSR8 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
YIPF4Q9BSR8 EIF4G1-209ENST00000414031 5569 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
YIPF4Q9BSR8 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
YIPF4Q9BSR8 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
YIPF4Q9BSR8 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
YIPF4Q9BSR8 CDC14C-201ENST00000428251 1719 ntBASIC15.26■□□□□ 0.03
YIPF4Q9BSR8 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
YIPF4Q9BSR8 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
YIPF4Q9BSR8 WASH6P-202ENST00000359512 1437 ntBASIC15.26■□□□□ 0.03
YIPF4Q9BSR8 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC15.26■□□□□ 0.03
YIPF4Q9BSR8 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
YIPF4Q9BSR8 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
YIPF4Q9BSR8 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
YIPF4Q9BSR8 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
YIPF4Q9BSR8 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
YIPF4Q9BSR8 DIDO1-201ENST00000266070 8574 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
YIPF4Q9BSR8 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
YIPF4Q9BSR8 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
YIPF4Q9BSR8 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
YIPF4Q9BSR8 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
YIPF4Q9BSR8 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
YIPF4Q9BSR8 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
YIPF4Q9BSR8 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC15.25■□□□□ 0.03
YIPF4Q9BSR8 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
YIPF4Q9BSR8 AC002056.1-201ENST00000395613 760 ntBASIC15.25■□□□□ 0.03
YIPF4Q9BSR8 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC15.25■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 42.8 ms