Protein–RNA interactions for Protein: Q99990

VGLL1, Transcription cofactor vestigial-like protein 1, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VGLL1Q99990 SIK1-201ENST00000270162 4712 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
VGLL1Q99990 CU639417.2-201ENST00000613488 4705 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
VGLL1Q99990 AC012569.1-201ENST00000591191 1524 ntBASIC12.32□□□□□ -0.44
VGLL1Q99990 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
VGLL1Q99990 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC12.32□□□□□ -0.44
VGLL1Q99990 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
VGLL1Q99990 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC12.32□□□□□ -0.44
VGLL1Q99990 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
VGLL1Q99990 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC12.32□□□□□ -0.44
VGLL1Q99990 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
VGLL1Q99990 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
VGLL1Q99990 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
VGLL1Q99990 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
VGLL1Q99990 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC12.32□□□□□ -0.44
VGLL1Q99990 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
VGLL1Q99990 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
VGLL1Q99990 AC073621.1-201ENST00000392730 636 ntBASIC12.32□□□□□ -0.44
VGLL1Q99990 SKP2-204ENST00000508514 821 ntTSL 3 BASIC12.32□□□□□ -0.44
VGLL1Q99990 OR7E14P-202ENST00000530490 1290 ntBASIC12.32□□□□□ -0.44
VGLL1Q99990 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC12.32□□□□□ -0.44
VGLL1Q99990 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
VGLL1Q99990 AC008667.4-201ENST00000607370 168 ntBASIC12.32□□□□□ -0.44
VGLL1Q99990 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC12.32□□□□□ -0.44
VGLL1Q99990 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC12.32□□□□□ -0.44
VGLL1Q99990 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC12.32□□□□□ -0.44
VGLL1Q99990 BRD2-202ENST00000374831 4807 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
VGLL1Q99990 MN1-201ENST00000302326 7556 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
VGLL1Q99990 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC12.32□□□□□ -0.44
VGLL1Q99990 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC12.32□□□□□ -0.44
VGLL1Q99990 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC12.32□□□□□ -0.44
VGLL1Q99990 NF2-209ENST00000403999 2999 ntAPPRIS ALT1 TSL 1 (best) BASIC12.32□□□□□ -0.44
VGLL1Q99990 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
VGLL1Q99990 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
VGLL1Q99990 POLL-206ENST00000370172 2308 ntTSL 2 BASIC12.32□□□□□ -0.44
VGLL1Q99990 ATP5F1-202ENST00000369722 3156 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
VGLL1Q99990 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC12.32□□□□□ -0.44
VGLL1Q99990 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC12.32□□□□□ -0.44
VGLL1Q99990 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
VGLL1Q99990 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC12.32□□□□□ -0.44
VGLL1Q99990 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
VGLL1Q99990 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
VGLL1Q99990 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC12.32□□□□□ -0.44
VGLL1Q99990 CCP110-201ENST00000381396 5446 ntAPPRIS ALT1 TSL 1 (best) BASIC12.32□□□□□ -0.44
VGLL1Q99990 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
VGLL1Q99990 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC12.32□□□□□ -0.44
VGLL1Q99990 FAM198B-203ENST00000585682 4900 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
VGLL1Q99990 WASHC2C-208ENST00000537517 4417 ntAPPRIS ALT2 TSL 2 BASIC12.31□□□□□ -0.44
VGLL1Q99990 UNC5B-202ENST00000373192 6451 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
VGLL1Q99990 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
VGLL1Q99990 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC12.31□□□□□ -0.44
VGLL1Q99990 KCNQ2-204ENST00000359125 3253 ntAPPRIS P4 TSL 1 (best) BASIC12.31□□□□□ -0.44
VGLL1Q99990 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
VGLL1Q99990 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC12.31□□□□□ -0.44
VGLL1Q99990 AC022532.1-201ENST00000624563 1728 ntBASIC12.31□□□□□ -0.44
VGLL1Q99990 BCL9L-202ENST00000526143 5514 ntTSL 5 BASIC12.31□□□□□ -0.44
VGLL1Q99990 CYB561D1-204ENST00000420578 3326 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
VGLL1Q99990 MIRLET7BHG-203ENST00000435439 2264 ntTSL 2 BASIC12.31□□□□□ -0.44
VGLL1Q99990 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
VGLL1Q99990 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC12.31□□□□□ -0.44
VGLL1Q99990 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC12.31□□□□□ -0.44
VGLL1Q99990 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
VGLL1Q99990 HIPK3-203ENST00000456517 7399 ntAPPRIS P1 TSL 2 BASIC12.31□□□□□ -0.44
VGLL1Q99990 CAMKK2-203ENST00000347034 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
VGLL1Q99990 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
VGLL1Q99990 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC12.31□□□□□ -0.44
VGLL1Q99990 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC12.31□□□□□ -0.44
VGLL1Q99990 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC12.31□□□□□ -0.44
VGLL1Q99990 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
VGLL1Q99990 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC12.31□□□□□ -0.44
VGLL1Q99990 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC12.31□□□□□ -0.44
VGLL1Q99990 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC12.31□□□□□ -0.44
VGLL1Q99990 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC12.31□□□□□ -0.44
VGLL1Q99990 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC12.31□□□□□ -0.44
VGLL1Q99990 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC12.31□□□□□ -0.44
VGLL1Q99990 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC12.31□□□□□ -0.44
VGLL1Q99990 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC12.31□□□□□ -0.44
VGLL1Q99990 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC12.31□□□□□ -0.44
VGLL1Q99990 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC12.31□□□□□ -0.44
VGLL1Q99990 PRR29-207ENST00000580752 458 ntTSL 3 BASIC12.31□□□□□ -0.44
VGLL1Q99990 LINC01711-201ENST00000598340 967 ntBASIC12.31□□□□□ -0.44
VGLL1Q99990 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC12.31□□□□□ -0.44
VGLL1Q99990 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
VGLL1Q99990 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC12.31□□□□□ -0.44
VGLL1Q99990 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC12.31□□□□□ -0.44
VGLL1Q99990 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
VGLL1Q99990 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
VGLL1Q99990 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC12.31□□□□□ -0.44
VGLL1Q99990 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
VGLL1Q99990 SLC41A1-201ENST00000367137 4997 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
VGLL1Q99990 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
VGLL1Q99990 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
VGLL1Q99990 TERF1-201ENST00000276602 3268 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
VGLL1Q99990 AFDN-203ENST00000366806 5962 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
VGLL1Q99990 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC12.31□□□□□ -0.44
VGLL1Q99990 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
VGLL1Q99990 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
VGLL1Q99990 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
VGLL1Q99990 COL11A2-202ENST00000361917 6104 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
VGLL1Q99990 ATP2B3-204ENST00000370186 6742 ntTSL 5 BASIC12.3□□□□□ -0.44
VGLL1Q99990 MCHR2-201ENST00000281806 2368 ntAPPRIS P1 TSL 2 BASIC12.3□□□□□ -0.44
Retrieved 100 of 98,524 protein–RNA pairs in 58.8 ms