Protein–RNA interactions for Protein: Q99496

RNF2, E3 ubiquitin-protein ligase RING2, humanhuman

Predictions only

Length 336 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF2Q99496 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC12.96□□□□□ -0.33
RNF2Q99496 CYGB-205ENST00000590175 830 ntTSL 3 BASIC12.96□□□□□ -0.33
RNF2Q99496 AC104692.2-201ENST00000603054 253 ntBASIC12.96□□□□□ -0.33
RNF2Q99496 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC12.96□□□□□ -0.33
RNF2Q99496 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC12.96□□□□□ -0.33
RNF2Q99496 AC148477.8-201ENST00000624298 468 ntBASIC12.96□□□□□ -0.33
RNF2Q99496 CYLD-202ENST00000398568 3536 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
RNF2Q99496 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC12.96□□□□□ -0.33
RNF2Q99496 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC12.96□□□□□ -0.33
RNF2Q99496 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
RNF2Q99496 PRPS1-204ENST00000372435 2073 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
RNF2Q99496 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
RNF2Q99496 AL031731.1-201ENST00000642131 2094 ntBASIC12.96□□□□□ -0.33
RNF2Q99496 JPH4-201ENST00000356300 4278 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
RNF2Q99496 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC12.96□□□□□ -0.34
RNF2Q99496 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
RNF2Q99496 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
RNF2Q99496 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
RNF2Q99496 SUCO-210ENST00000616058 5495 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
RNF2Q99496 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
RNF2Q99496 USP19-203ENST00000398892 4622 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.34
RNF2Q99496 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.34
RNF2Q99496 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.34
RNF2Q99496 TRAPPC8-201ENST00000283351 6226 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
RNF2Q99496 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC12.95□□□□□ -0.34
RNF2Q99496 ZNF280D-207ENST00000559237 4902 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
RNF2Q99496 FMO5-201ENST00000254090 2632 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
RNF2Q99496 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
RNF2Q99496 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC12.95□□□□□ -0.34
RNF2Q99496 EML4-201ENST00000318522 5549 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
RNF2Q99496 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
RNF2Q99496 AL671710.1-201ENST00000610245 2349 ntBASIC12.95□□□□□ -0.34
RNF2Q99496 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
RNF2Q99496 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
RNF2Q99496 RER1-209ENST00000605895 3044 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
RNF2Q99496 CICP13-201ENST00000422015 2789 ntBASIC12.95□□□□□ -0.34
RNF2Q99496 LSS-202ENST00000397728 4936 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
RNF2Q99496 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
RNF2Q99496 MARVELD1-201ENST00000285605 3221 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.34
RNF2Q99496 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
RNF2Q99496 DDX59-206ENST00000447706 2900 ntTSL 2 BASIC12.95□□□□□ -0.34
RNF2Q99496 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
RNF2Q99496 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
RNF2Q99496 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
RNF2Q99496 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
RNF2Q99496 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC12.95□□□□□ -0.34
RNF2Q99496 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
RNF2Q99496 PTCHD3P3-201ENST00000403073 906 ntBASIC12.95□□□□□ -0.34
RNF2Q99496 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC12.95□□□□□ -0.34
RNF2Q99496 WDR53-204ENST00000433160 887 ntTSL 5 BASIC12.95□□□□□ -0.34
RNF2Q99496 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
RNF2Q99496 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC12.95□□□□□ -0.34
RNF2Q99496 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC12.95□□□□□ -0.34
RNF2Q99496 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC12.95□□□□□ -0.34
RNF2Q99496 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
RNF2Q99496 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC12.95□□□□□ -0.34
RNF2Q99496 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
RNF2Q99496 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC12.95□□□□□ -0.34
RNF2Q99496 AL512652.2-201ENST00000625156 1716 ntBASIC12.95□□□□□ -0.34
RNF2Q99496 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
RNF2Q99496 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
RNF2Q99496 DMTN-201ENST00000265800 2554 ntTSL 5 BASIC12.95□□□□□ -0.34
RNF2Q99496 DMTN-207ENST00000517305 2551 ntTSL 5 BASIC12.95□□□□□ -0.34
RNF2Q99496 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
RNF2Q99496 SEMA5B-206ENST00000451055 4579 ntAPPRIS ALT2 TSL 2 BASIC12.95□□□□□ -0.34
RNF2Q99496 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
RNF2Q99496 MAP1S-201ENST00000324096 3419 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
RNF2Q99496 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC12.95□□□□□ -0.34
RNF2Q99496 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC12.95□□□□□ -0.34
RNF2Q99496 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC12.95□□□□□ -0.34
RNF2Q99496 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
RNF2Q99496 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
RNF2Q99496 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
RNF2Q99496 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.34
RNF2Q99496 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
RNF2Q99496 FZD5-201ENST00000295417 6708 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
RNF2Q99496 THSD4-202ENST00000355327 9200 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
RNF2Q99496 ACE-203ENST00000413513 2237 ntTSL 2 BASIC12.94□□□□□ -0.34
RNF2Q99496 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
RNF2Q99496 SLIT1-201ENST00000266058 7925 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
RNF2Q99496 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
RNF2Q99496 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
RNF2Q99496 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
RNF2Q99496 RGPD6-202ENST00000330331 2848 ntTSL 2 BASIC12.94□□□□□ -0.34
RNF2Q99496 RGPD8-202ENST00000330575 2848 ntTSL 2 BASIC12.94□□□□□ -0.34
RNF2Q99496 PCDHB13-201ENST00000341948 5061 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
RNF2Q99496 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC12.94□□□□□ -0.34
RNF2Q99496 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
RNF2Q99496 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC12.94□□□□□ -0.34
RNF2Q99496 SOGA3-201ENST00000465909 3756 ntTSL 5 BASIC12.94□□□□□ -0.34
RNF2Q99496 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
RNF2Q99496 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC12.94□□□□□ -0.34
RNF2Q99496 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
RNF2Q99496 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC12.94□□□□□ -0.34
RNF2Q99496 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC12.94□□□□□ -0.34
RNF2Q99496 PI4KAP1-204ENST00000612579 1703 ntBASIC12.94□□□□□ -0.34
RNF2Q99496 YTHDF3-216ENST00000623280 5193 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
RNF2Q99496 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
RNF2Q99496 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
RNF2Q99496 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 57.7 ms