Protein–RNA interactions for Protein: Q96LR5

UBE2E2, Ubiquitin-conjugating enzyme E2 E2, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2E2Q96LR5 AC092364.2-202ENST00000597012 1073 ntBASIC12.51□□□□□ -0.41
UBE2E2Q96LR5 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC12.51□□□□□ -0.41
UBE2E2Q96LR5 TEX28P1-201ENST00000613479 1221 ntBASIC12.51□□□□□ -0.41
UBE2E2Q96LR5 TEX28P2-201ENST00000617764 1221 ntBASIC12.51□□□□□ -0.41
UBE2E2Q96LR5 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
UBE2E2Q96LR5 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
UBE2E2Q96LR5 AC087499.5-201ENST00000452760 1342 ntBASIC12.51□□□□□ -0.41
UBE2E2Q96LR5 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC12.51□□□□□ -0.41
UBE2E2Q96LR5 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
UBE2E2Q96LR5 AC006449.6-201ENST00000612330 2296 ntBASIC12.51□□□□□ -0.41
UBE2E2Q96LR5 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
UBE2E2Q96LR5 KRT8P12-202ENST00000472924 1397 ntBASIC12.51□□□□□ -0.41
UBE2E2Q96LR5 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC12.51□□□□□ -0.41
UBE2E2Q96LR5 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
UBE2E2Q96LR5 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC12.51□□□□□ -0.41
UBE2E2Q96LR5 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
UBE2E2Q96LR5 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
UBE2E2Q96LR5 TMEM237-202ENST00000409444 5592 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
UBE2E2Q96LR5 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC12.51□□□□□ -0.41
UBE2E2Q96LR5 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC12.51□□□□□ -0.41
UBE2E2Q96LR5 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC12.51□□□□□ -0.41
UBE2E2Q96LR5 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC12.51□□□□□ -0.41
UBE2E2Q96LR5 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
UBE2E2Q96LR5 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
UBE2E2Q96LR5 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC12.51□□□□□ -0.41
UBE2E2Q96LR5 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
UBE2E2Q96LR5 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
UBE2E2Q96LR5 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
UBE2E2Q96LR5 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
UBE2E2Q96LR5 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
UBE2E2Q96LR5 NID1-201ENST00000264187 5864 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
UBE2E2Q96LR5 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
UBE2E2Q96LR5 NUDT16-203ENST00000537561 5943 ntTSL 5 BASIC12.5□□□□□ -0.41
UBE2E2Q96LR5 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC12.5□□□□□ -0.41
UBE2E2Q96LR5 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
UBE2E2Q96LR5 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
UBE2E2Q96LR5 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
UBE2E2Q96LR5 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC12.5□□□□□ -0.41
UBE2E2Q96LR5 CHDH-201ENST00000315251 7665 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
UBE2E2Q96LR5 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC12.5□□□□□ -0.41
UBE2E2Q96LR5 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC12.5□□□□□ -0.41
UBE2E2Q96LR5 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
UBE2E2Q96LR5 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
UBE2E2Q96LR5 HCFC1-201ENST00000310441 8869 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
UBE2E2Q96LR5 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
UBE2E2Q96LR5 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC12.5□□□□□ -0.41
UBE2E2Q96LR5 AC004987.2-201ENST00000395959 1148 ntBASIC12.5□□□□□ -0.41
UBE2E2Q96LR5 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
UBE2E2Q96LR5 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC12.5□□□□□ -0.41
UBE2E2Q96LR5 RPL37AP1-201ENST00000412502 279 ntBASIC12.5□□□□□ -0.41
UBE2E2Q96LR5 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC12.5□□□□□ -0.41
UBE2E2Q96LR5 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
UBE2E2Q96LR5 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
UBE2E2Q96LR5 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
UBE2E2Q96LR5 MPI-209ENST00000564003 1195 ntTSL 2 BASIC12.5□□□□□ -0.41
UBE2E2Q96LR5 NAA60-208ENST00000570819 833 ntTSL 2 BASIC12.5□□□□□ -0.41
UBE2E2Q96LR5 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC12.5□□□□□ -0.41
UBE2E2Q96LR5 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
UBE2E2Q96LR5 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC12.5□□□□□ -0.41
UBE2E2Q96LR5 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC12.5□□□□□ -0.41
UBE2E2Q96LR5 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
UBE2E2Q96LR5 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
UBE2E2Q96LR5 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC12.5□□□□□ -0.41
UBE2E2Q96LR5 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
UBE2E2Q96LR5 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC12.5□□□□□ -0.41
UBE2E2Q96LR5 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
UBE2E2Q96LR5 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
UBE2E2Q96LR5 SUCO-204ENST00000608151 5790 ntTSL 5 BASIC12.5□□□□□ -0.41
UBE2E2Q96LR5 SATB2-205ENST00000443023 6194 ntTSL 5 BASIC12.5□□□□□ -0.41
UBE2E2Q96LR5 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC12.5□□□□□ -0.41
UBE2E2Q96LR5 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC12.5□□□□□ -0.41
UBE2E2Q96LR5 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC12.5□□□□□ -0.41
UBE2E2Q96LR5 PCDHA14-201ENST00000506751 2298 ntBASIC12.5□□□□□ -0.41
UBE2E2Q96LR5 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
UBE2E2Q96LR5 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC12.5□□□□□ -0.41
UBE2E2Q96LR5 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
UBE2E2Q96LR5 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
UBE2E2Q96LR5 SLCO5A1-201ENST00000260126 9076 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
UBE2E2Q96LR5 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
UBE2E2Q96LR5 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
UBE2E2Q96LR5 DNAJC21-202ENST00000382021 6208 ntTSL 2 BASIC12.5□□□□□ -0.41
UBE2E2Q96LR5 MPP6-201ENST00000222644 8452 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
UBE2E2Q96LR5 PER2-201ENST00000254657 6385 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
UBE2E2Q96LR5 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
UBE2E2Q96LR5 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC12.49□□□□□ -0.41
UBE2E2Q96LR5 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC12.49□□□□□ -0.41
UBE2E2Q96LR5 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC12.49□□□□□ -0.41
UBE2E2Q96LR5 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
UBE2E2Q96LR5 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC12.49□□□□□ -0.41
UBE2E2Q96LR5 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC12.49□□□□□ -0.41
UBE2E2Q96LR5 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
UBE2E2Q96LR5 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
UBE2E2Q96LR5 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
UBE2E2Q96LR5 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC12.49□□□□□ -0.41
UBE2E2Q96LR5 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
UBE2E2Q96LR5 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC12.49□□□□□ -0.41
UBE2E2Q96LR5 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC12.49□□□□□ -0.41
UBE2E2Q96LR5 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
UBE2E2Q96LR5 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC12.49□□□□□ -0.41
UBE2E2Q96LR5 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC12.49□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 35.9 ms