Protein–RNA interactions for Protein: Q96JM3

CHAMP1, Chromosome alignment-maintaining phosphoprotein 1, humanhuman

Predictions only

Length 812 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHAMP1Q96JM3 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC18.76■□□□□ 0.59
CHAMP1Q96JM3 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
CHAMP1Q96JM3 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC18.76■□□□□ 0.59
CHAMP1Q96JM3 PI16-203ENST00000611814 2083 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
CHAMP1Q96JM3 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CHAMP1Q96JM3 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
CHAMP1Q96JM3 LRCH1-202ENST00000389797 3314 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
CHAMP1Q96JM3 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
CHAMP1Q96JM3 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
CHAMP1Q96JM3 RNF25-201ENST00000295704 1914 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CHAMP1Q96JM3 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC18.76■□□□□ 0.59
CHAMP1Q96JM3 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CHAMP1Q96JM3 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CHAMP1Q96JM3 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC18.76■□□□□ 0.59
CHAMP1Q96JM3 MALSU1-202ENST00000466681 3044 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CHAMP1Q96JM3 AC006058.4-201ENST00000624016 1670 ntBASIC18.76■□□□□ 0.59
CHAMP1Q96JM3 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CHAMP1Q96JM3 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CHAMP1Q96JM3 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC18.76■□□□□ 0.59
CHAMP1Q96JM3 DNAJC14-201ENST00000317269 3330 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CHAMP1Q96JM3 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
CHAMP1Q96JM3 RNF222-202ENST00000399398 3062 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
CHAMP1Q96JM3 AC112693.3-201ENST00000624819 1983 ntBASIC18.75■□□□□ 0.59
CHAMP1Q96JM3 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
CHAMP1Q96JM3 AL009178.2-201ENST00000597278 2719 ntBASIC18.75■□□□□ 0.59
CHAMP1Q96JM3 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CHAMP1Q96JM3 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC18.75■□□□□ 0.59
CHAMP1Q96JM3 E2F6-202ENST00000381525 3218 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CHAMP1Q96JM3 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CHAMP1Q96JM3 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CHAMP1Q96JM3 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CHAMP1Q96JM3 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CHAMP1Q96JM3 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC18.75■□□□□ 0.59
CHAMP1Q96JM3 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CHAMP1Q96JM3 VMO1-203ENST00000416307 712 ntTSL 2 BASIC18.75■□□□□ 0.59
CHAMP1Q96JM3 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC18.75■□□□□ 0.59
CHAMP1Q96JM3 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC18.75■□□□□ 0.59
CHAMP1Q96JM3 AC073648.2-201ENST00000510116 352 ntBASIC18.75■□□□□ 0.59
CHAMP1Q96JM3 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC18.75■□□□□ 0.59
CHAMP1Q96JM3 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC18.75■□□□□ 0.59
CHAMP1Q96JM3 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC18.75■□□□□ 0.59
CHAMP1Q96JM3 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC18.75■□□□□ 0.59
CHAMP1Q96JM3 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
CHAMP1Q96JM3 LRRFIP1P1-201ENST00000498774 2246 ntBASIC18.75■□□□□ 0.59
CHAMP1Q96JM3 ZBTB37-203ENST00000367704 2323 ntTSL 2 BASIC18.75■□□□□ 0.59
CHAMP1Q96JM3 TCAF2P1-201ENST00000291129 2421 ntBASIC18.75■□□□□ 0.59
CHAMP1Q96JM3 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CHAMP1Q96JM3 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC18.75■□□□□ 0.59
CHAMP1Q96JM3 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CHAMP1Q96JM3 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CHAMP1Q96JM3 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC18.75■□□□□ 0.59
CHAMP1Q96JM3 CRLS1-203ENST00000452938 3859 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CHAMP1Q96JM3 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
CHAMP1Q96JM3 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CHAMP1Q96JM3 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CHAMP1Q96JM3 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC18.75■□□□□ 0.59
CHAMP1Q96JM3 AKAP7-204ENST00000431975 2954 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
CHAMP1Q96JM3 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC18.75■□□□□ 0.59
CHAMP1Q96JM3 FAM114A2-215ENST00000522858 3379 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CHAMP1Q96JM3 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC18.75■□□□□ 0.59
CHAMP1Q96JM3 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CHAMP1Q96JM3 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC18.74■□□□□ 0.59
CHAMP1Q96JM3 ANKMY1-203ENST00000373318 2449 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CHAMP1Q96JM3 RGPD6-202ENST00000330331 2848 ntTSL 2 BASIC18.74■□□□□ 0.59
CHAMP1Q96JM3 RGPD8-202ENST00000330575 2848 ntTSL 2 BASIC18.74■□□□□ 0.59
CHAMP1Q96JM3 GPSM1-202ENST00000354753 3533 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
CHAMP1Q96JM3 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
CHAMP1Q96JM3 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
CHAMP1Q96JM3 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC18.74■□□□□ 0.59
CHAMP1Q96JM3 NMUR1-201ENST00000305141 3298 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CHAMP1Q96JM3 PODN-202ENST00000371500 3287 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
CHAMP1Q96JM3 PRR23C-201ENST00000413199 2791 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
CHAMP1Q96JM3 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CHAMP1Q96JM3 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
CHAMP1Q96JM3 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
CHAMP1Q96JM3 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC18.74■□□□□ 0.59
CHAMP1Q96JM3 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC18.74■□□□□ 0.59
CHAMP1Q96JM3 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
CHAMP1Q96JM3 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CHAMP1Q96JM3 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
CHAMP1Q96JM3 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CHAMP1Q96JM3 MIR1233-2-201ENST00000408138 82 ntBASIC18.74■□□□□ 0.59
CHAMP1Q96JM3 MIR1233-1-201ENST00000408722 82 ntBASIC18.74■□□□□ 0.59
CHAMP1Q96JM3 CXCL1P1-201ENST00000502804 216 ntBASIC18.74■□□□□ 0.59
CHAMP1Q96JM3 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC18.74■□□□□ 0.59
CHAMP1Q96JM3 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CHAMP1Q96JM3 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CHAMP1Q96JM3 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC18.74■□□□□ 0.59
CHAMP1Q96JM3 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC18.74■□□□□ 0.59
CHAMP1Q96JM3 FAM215A-202ENST00000632077 792 ntBASIC18.74■□□□□ 0.59
CHAMP1Q96JM3 FCHO1-206ENST00000594202 3214 ntTSL 5 BASIC18.74■□□□□ 0.59
CHAMP1Q96JM3 SEPT9-208ENST00000541152 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
CHAMP1Q96JM3 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
CHAMP1Q96JM3 ADGRA1-AS1-202ENST00000444433 2646 ntTSL 3 BASIC18.74■□□□□ 0.59
CHAMP1Q96JM3 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
CHAMP1Q96JM3 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC18.74■□□□□ 0.59
CHAMP1Q96JM3 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC18.74■□□□□ 0.59
CHAMP1Q96JM3 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CHAMP1Q96JM3 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
CHAMP1Q96JM3 MED16-203ENST00000325464 2922 ntAPPRIS P2 TSL 5 BASIC18.73■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 46.2 ms