Protein–RNA interactions for Protein: Q92544

TM9SF4, Transmembrane 9 superfamily member 4, humanhuman

Predictions only

Length 642 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4Q92544 ALOX12P2-203ENST00000570921 1945 ntBASIC15.31■□□□□ 0.04
TM9SF4Q92544 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
TM9SF4Q92544 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
TM9SF4Q92544 AL645728.1-201ENST00000366221 2101 ntBASIC15.31■□□□□ 0.04
TM9SF4Q92544 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC15.31■□□□□ 0.04
TM9SF4Q92544 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC15.31■□□□□ 0.04
TM9SF4Q92544 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
TM9SF4Q92544 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
TM9SF4Q92544 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC15.3■□□□□ 0.04
TM9SF4Q92544 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC15.3■□□□□ 0.04
TM9SF4Q92544 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TM9SF4Q92544 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TM9SF4Q92544 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TM9SF4Q92544 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TM9SF4Q92544 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
TM9SF4Q92544 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TM9SF4Q92544 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC15.3■□□□□ 0.04
TM9SF4Q92544 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC15.3■□□□□ 0.04
TM9SF4Q92544 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
TM9SF4Q92544 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
TM9SF4Q92544 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
TM9SF4Q92544 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC15.3■□□□□ 0.04
TM9SF4Q92544 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TM9SF4Q92544 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC15.3■□□□□ 0.04
TM9SF4Q92544 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
TM9SF4Q92544 FRMD8P1-201ENST00000440433 1524 ntBASIC15.3■□□□□ 0.04
TM9SF4Q92544 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC15.3■□□□□ 0.04
TM9SF4Q92544 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TM9SF4Q92544 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC15.3■□□□□ 0.04
TM9SF4Q92544 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC15.3■□□□□ 0.04
TM9SF4Q92544 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC15.3■□□□□ 0.04
TM9SF4Q92544 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC15.3■□□□□ 0.04
TM9SF4Q92544 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC15.3■□□□□ 0.04
TM9SF4Q92544 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC15.3■□□□□ 0.04
TM9SF4Q92544 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC15.3■□□□□ 0.04
TM9SF4Q92544 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TM9SF4Q92544 AC018529.1-201ENST00000613063 361 ntBASIC15.3■□□□□ 0.04
TM9SF4Q92544 AC009118.2-201ENST00000613275 655 ntBASIC15.3■□□□□ 0.04
TM9SF4Q92544 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TM9SF4Q92544 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
TM9SF4Q92544 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TM9SF4Q92544 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC15.3■□□□□ 0.04
TM9SF4Q92544 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TM9SF4Q92544 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TM9SF4Q92544 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TM9SF4Q92544 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
TM9SF4Q92544 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
TM9SF4Q92544 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
TM9SF4Q92544 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC15.29■□□□□ 0.04
TM9SF4Q92544 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC15.29■□□□□ 0.04
TM9SF4Q92544 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC15.29■□□□□ 0.04
TM9SF4Q92544 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TM9SF4Q92544 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
TM9SF4Q92544 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
TM9SF4Q92544 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TM9SF4Q92544 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
TM9SF4Q92544 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
TM9SF4Q92544 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
TM9SF4Q92544 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC15.29■□□□□ 0.04
TM9SF4Q92544 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC15.29■□□□□ 0.04
TM9SF4Q92544 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
TM9SF4Q92544 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC15.29■□□□□ 0.04
TM9SF4Q92544 AC005225.4-201ENST00000557330 545 ntBASIC15.29■□□□□ 0.04
TM9SF4Q92544 MIR4453-201ENST00000584019 89 ntBASIC15.29■□□□□ 0.04
TM9SF4Q92544 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC15.29■□□□□ 0.04
TM9SF4Q92544 COQ4-205ENST00000609948 956 ntTSL 2 BASIC15.29■□□□□ 0.04
TM9SF4Q92544 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TM9SF4Q92544 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
TM9SF4Q92544 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
TM9SF4Q92544 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
TM9SF4Q92544 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
TM9SF4Q92544 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC15.29■□□□□ 0.04
TM9SF4Q92544 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC15.29■□□□□ 0.04
TM9SF4Q92544 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TM9SF4Q92544 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC15.29■□□□□ 0.04
TM9SF4Q92544 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TM9SF4Q92544 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
TM9SF4Q92544 PPM1E-201ENST00000308249 6542 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TM9SF4Q92544 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
TM9SF4Q92544 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TM9SF4Q92544 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TM9SF4Q92544 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC15.29■□□□□ 0.04
TM9SF4Q92544 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
TM9SF4Q92544 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC15.29■□□□□ 0.04
TM9SF4Q92544 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
TM9SF4Q92544 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
TM9SF4Q92544 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
TM9SF4Q92544 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
TM9SF4Q92544 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TM9SF4Q92544 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
TM9SF4Q92544 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
TM9SF4Q92544 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
TM9SF4Q92544 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
TM9SF4Q92544 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC15.28■□□□□ 0.04
TM9SF4Q92544 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC15.28■□□□□ 0.04
TM9SF4Q92544 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC15.28■□□□□ 0.04
TM9SF4Q92544 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
TM9SF4Q92544 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC15.28■□□□□ 0.04
TM9SF4Q92544 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
TM9SF4Q92544 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 26.7 ms