Protein–RNA interactions for Protein: Q8WU68

U2AF1L4, Splicing factor U2AF 26 kDa subunit, humanhuman

Known RBP Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1L4Q8WU68 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
U2AF1L4Q8WU68 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC18.44■□□□□ 0.54
U2AF1L4Q8WU68 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
U2AF1L4Q8WU68 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
U2AF1L4Q8WU68 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
U2AF1L4Q8WU68 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
U2AF1L4Q8WU68 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
U2AF1L4Q8WU68 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
U2AF1L4Q8WU68 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
U2AF1L4Q8WU68 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
U2AF1L4Q8WU68 POLR2I-201ENST00000221859 913 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
U2AF1L4Q8WU68 POLD4-201ENST00000312419 918 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
U2AF1L4Q8WU68 AL139289.2-201ENST00000424948 661 ntTSL 2 BASIC18.44■□□□□ 0.54
U2AF1L4Q8WU68 AC099754.1-201ENST00000435884 454 ntTSL 3 BASIC18.44■□□□□ 0.54
U2AF1L4Q8WU68 PARP8-206ENST00000503665 572 ntTSL 4 BASIC18.44■□□□□ 0.54
U2AF1L4Q8WU68 FADS2-205ENST00000517839 469 ntTSL 3 BASIC18.44■□□□□ 0.54
U2AF1L4Q8WU68 OSGIN2-203ENST00000520659 801 ntTSL 2 BASIC18.44■□□□□ 0.54
U2AF1L4Q8WU68 RCN1-210ENST00000532942 1191 ntAPPRIS ALT2 TSL 2 BASIC18.44■□□□□ 0.54
U2AF1L4Q8WU68 C12orf49-204ENST00000548356 923 ntTSL 2 BASIC18.44■□□□□ 0.54
U2AF1L4Q8WU68 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
U2AF1L4Q8WU68 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC18.44■□□□□ 0.54
U2AF1L4Q8WU68 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
U2AF1L4Q8WU68 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
U2AF1L4Q8WU68 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
U2AF1L4Q8WU68 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC18.44■□□□□ 0.54
U2AF1L4Q8WU68 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC18.44■□□□□ 0.54
U2AF1L4Q8WU68 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
U2AF1L4Q8WU68 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
U2AF1L4Q8WU68 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC18.44■□□□□ 0.54
U2AF1L4Q8WU68 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
U2AF1L4Q8WU68 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
U2AF1L4Q8WU68 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC18.44■□□□□ 0.54
U2AF1L4Q8WU68 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
U2AF1L4Q8WU68 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
U2AF1L4Q8WU68 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
U2AF1L4Q8WU68 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC18.43■□□□□ 0.54
U2AF1L4Q8WU68 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
U2AF1L4Q8WU68 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
U2AF1L4Q8WU68 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC18.43■□□□□ 0.54
U2AF1L4Q8WU68 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
U2AF1L4Q8WU68 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
U2AF1L4Q8WU68 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC18.43■□□□□ 0.54
U2AF1L4Q8WU68 KRT8P49-201ENST00000604166 1432 ntBASIC18.43■□□□□ 0.54
U2AF1L4Q8WU68 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC18.43■□□□□ 0.54
U2AF1L4Q8WU68 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC18.43■□□□□ 0.54
U2AF1L4Q8WU68 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
U2AF1L4Q8WU68 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC18.43■□□□□ 0.54
U2AF1L4Q8WU68 BRWD1P1-201ENST00000401091 371 ntBASIC18.43■□□□□ 0.54
U2AF1L4Q8WU68 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC18.43■□□□□ 0.54
U2AF1L4Q8WU68 TAF8-204ENST00000456846 1293 ntAPPRIS ALT1 TSL 1 (best) BASIC18.43■□□□□ 0.54
U2AF1L4Q8WU68 AC020659.2-202ENST00000512295 513 ntTSL 2 BASIC18.43■□□□□ 0.54
U2AF1L4Q8WU68 AC109479.1-201ENST00000519603 624 ntTSL 2 BASIC18.43■□□□□ 0.54
U2AF1L4Q8WU68 AP001007.1-201ENST00000526796 645 ntTSL 2 BASIC18.43■□□□□ 0.54
U2AF1L4Q8WU68 AC124947.2-201ENST00000547118 1133 ntBASIC18.43■□□□□ 0.54
U2AF1L4Q8WU68 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC18.43■□□□□ 0.54
U2AF1L4Q8WU68 AC027601.2-201ENST00000571085 805 ntTSL 5 BASIC18.43■□□□□ 0.54
U2AF1L4Q8WU68 TNNT1-209ENST00000587758 1016 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
U2AF1L4Q8WU68 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
U2AF1L4Q8WU68 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
U2AF1L4Q8WU68 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
U2AF1L4Q8WU68 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
U2AF1L4Q8WU68 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC18.43■□□□□ 0.54
U2AF1L4Q8WU68 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC18.43■□□□□ 0.54
U2AF1L4Q8WU68 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
U2AF1L4Q8WU68 HACD3-202ENST00000442729 1332 ntTSL 2 BASIC18.43■□□□□ 0.54
U2AF1L4Q8WU68 EIF3K-203ENST00000545173 1327 ntAPPRIS ALT1 TSL 2 BASIC18.43■□□□□ 0.54
U2AF1L4Q8WU68 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
U2AF1L4Q8WU68 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
U2AF1L4Q8WU68 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
U2AF1L4Q8WU68 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
U2AF1L4Q8WU68 SPAAR-202ENST00000443779 1612 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
U2AF1L4Q8WU68 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
U2AF1L4Q8WU68 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
U2AF1L4Q8WU68 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC18.42■□□□□ 0.54
U2AF1L4Q8WU68 FLT3LG-201ENST00000204637 1046 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
U2AF1L4Q8WU68 GTSF1-201ENST00000305879 804 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
U2AF1L4Q8WU68 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
U2AF1L4Q8WU68 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC18.42■□□□□ 0.54
U2AF1L4Q8WU68 AF274855.1-203ENST00000424126 800 ntTSL 3 BASIC18.42■□□□□ 0.54
U2AF1L4Q8WU68 TMEM176B-202ENST00000429904 1206 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
U2AF1L4Q8WU68 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC18.42■□□□□ 0.54
U2AF1L4Q8WU68 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC18.42■□□□□ 0.54
U2AF1L4Q8WU68 AL355994.2-201ENST00000447882 704 ntBASIC18.42■□□□□ 0.54
U2AF1L4Q8WU68 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC18.42■□□□□ 0.54
U2AF1L4Q8WU68 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC18.42■□□□□ 0.54
U2AF1L4Q8WU68 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC18.42■□□□□ 0.54
U2AF1L4Q8WU68 AURKB-202ENST00000534871 1167 ntTSL 2 BASIC18.42■□□□□ 0.54
U2AF1L4Q8WU68 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC18.42■□□□□ 0.54
U2AF1L4Q8WU68 AC012615.4-201ENST00000586694 607 ntTSL 4 BASIC18.42■□□□□ 0.54
U2AF1L4Q8WU68 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC18.42■□□□□ 0.54
U2AF1L4Q8WU68 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC18.42■□□□□ 0.54
U2AF1L4Q8WU68 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
U2AF1L4Q8WU68 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
U2AF1L4Q8WU68 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC18.42■□□□□ 0.54
U2AF1L4Q8WU68 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
U2AF1L4Q8WU68 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
U2AF1L4Q8WU68 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
U2AF1L4Q8WU68 TUBB1P2-201ENST00000422712 1306 ntBASIC18.42■□□□□ 0.54
U2AF1L4Q8WU68 TUBB1P1-201ENST00000503144 1300 ntBASIC18.42■□□□□ 0.54
U2AF1L4Q8WU68 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC18.42■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms