Protein–RNA interactions for Protein: Q8TBC4

UBA3, NEDD8-activating enzyme E1 catalytic subunit, humanhuman

Predictions only

Length 463 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3Q8TBC4 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC17.1■□□□□ 0.33
UBA3Q8TBC4 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
UBA3Q8TBC4 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC17.1■□□□□ 0.33
UBA3Q8TBC4 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
UBA3Q8TBC4 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
UBA3Q8TBC4 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC17.1■□□□□ 0.33
UBA3Q8TBC4 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
UBA3Q8TBC4 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
UBA3Q8TBC4 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
UBA3Q8TBC4 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
UBA3Q8TBC4 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
UBA3Q8TBC4 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC17.1■□□□□ 0.33
UBA3Q8TBC4 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
UBA3Q8TBC4 CDC14C-201ENST00000428251 1719 ntBASIC17.1■□□□□ 0.33
UBA3Q8TBC4 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC17.1■□□□□ 0.33
UBA3Q8TBC4 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
UBA3Q8TBC4 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC17.1■□□□□ 0.33
UBA3Q8TBC4 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC17.09■□□□□ 0.33
UBA3Q8TBC4 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
UBA3Q8TBC4 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
UBA3Q8TBC4 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC17.09■□□□□ 0.33
UBA3Q8TBC4 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC17.09■□□□□ 0.33
UBA3Q8TBC4 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
UBA3Q8TBC4 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
UBA3Q8TBC4 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
UBA3Q8TBC4 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
UBA3Q8TBC4 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
UBA3Q8TBC4 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
UBA3Q8TBC4 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
UBA3Q8TBC4 GGCT-205ENST00000409436 954 ntTSL 3 BASIC17.09■□□□□ 0.33
UBA3Q8TBC4 MTND6P24-201ENST00000440466 518 ntBASIC17.09■□□□□ 0.33
UBA3Q8TBC4 PPP6R2P1-201ENST00000450880 1275 ntBASIC17.09■□□□□ 0.33
UBA3Q8TBC4 AC245100.5-201ENST00000452108 331 ntBASIC17.09■□□□□ 0.33
UBA3Q8TBC4 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC17.09■□□□□ 0.33
UBA3Q8TBC4 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC17.09■□□□□ 0.33
UBA3Q8TBC4 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC17.09■□□□□ 0.33
UBA3Q8TBC4 LSM12-202ENST00000585388 942 ntTSL 3 BASIC17.09■□□□□ 0.33
UBA3Q8TBC4 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC17.09■□□□□ 0.33
UBA3Q8TBC4 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC17.09■□□□□ 0.33
UBA3Q8TBC4 TUBB3P1-201ENST00000405796 1332 ntBASIC17.09■□□□□ 0.33
UBA3Q8TBC4 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
UBA3Q8TBC4 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
UBA3Q8TBC4 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
UBA3Q8TBC4 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC17.09■□□□□ 0.33
UBA3Q8TBC4 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
UBA3Q8TBC4 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
UBA3Q8TBC4 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
UBA3Q8TBC4 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
UBA3Q8TBC4 AC134407.2-201ENST00000625089 1978 ntBASIC17.09■□□□□ 0.33
UBA3Q8TBC4 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
UBA3Q8TBC4 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC17.09■□□□□ 0.33
UBA3Q8TBC4 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC17.09■□□□□ 0.33
UBA3Q8TBC4 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
UBA3Q8TBC4 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
UBA3Q8TBC4 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
UBA3Q8TBC4 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
UBA3Q8TBC4 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
UBA3Q8TBC4 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
UBA3Q8TBC4 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
UBA3Q8TBC4 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.33
UBA3Q8TBC4 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.33
UBA3Q8TBC4 AC008894.3-201ENST00000624324 3103 ntBASIC17.08■□□□□ 0.33
UBA3Q8TBC4 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
UBA3Q8TBC4 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.33
UBA3Q8TBC4 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.33
UBA3Q8TBC4 LINC02447-202ENST00000501888 2146 ntBASIC17.08■□□□□ 0.33
UBA3Q8TBC4 OVCH1-AS1-204ENST00000641955 5529 ntBASIC17.08■□□□□ 0.33
UBA3Q8TBC4 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
UBA3Q8TBC4 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC17.08■□□□□ 0.32
UBA3Q8TBC4 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
UBA3Q8TBC4 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
UBA3Q8TBC4 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC17.08■□□□□ 0.32
UBA3Q8TBC4 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
UBA3Q8TBC4 AL691432.1-201ENST00000596308 1422 ntBASIC17.08■□□□□ 0.32
UBA3Q8TBC4 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC17.08■□□□□ 0.32
UBA3Q8TBC4 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
UBA3Q8TBC4 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
UBA3Q8TBC4 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC17.08■□□□□ 0.32
UBA3Q8TBC4 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
UBA3Q8TBC4 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC17.08■□□□□ 0.32
UBA3Q8TBC4 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC17.08■□□□□ 0.32
UBA3Q8TBC4 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC17.08■□□□□ 0.32
UBA3Q8TBC4 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC17.08■□□□□ 0.32
UBA3Q8TBC4 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC17.08■□□□□ 0.32
UBA3Q8TBC4 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
UBA3Q8TBC4 CCDC74BP1-201ENST00000508880 1123 ntBASIC17.08■□□□□ 0.32
UBA3Q8TBC4 RPL28-205ENST00000558131 444 ntTSL 5 BASIC17.08■□□□□ 0.32
UBA3Q8TBC4 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC17.08■□□□□ 0.32
UBA3Q8TBC4 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC17.08■□□□□ 0.32
UBA3Q8TBC4 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC17.08■□□□□ 0.32
UBA3Q8TBC4 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
UBA3Q8TBC4 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC17.08■□□□□ 0.32
UBA3Q8TBC4 AC007967.4-201ENST00000614700 386 ntBASIC17.08■□□□□ 0.32
UBA3Q8TBC4 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC17.08■□□□□ 0.32
UBA3Q8TBC4 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC17.08■□□□□ 0.32
UBA3Q8TBC4 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC17.08■□□□□ 0.32
UBA3Q8TBC4 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
UBA3Q8TBC4 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
UBA3Q8TBC4 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
UBA3Q8TBC4 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms