Protein–RNA interactions for Protein: Q8NEB9

PIK3C3, Phosphatidylinositol 3-kinase catalytic subunit type 3, humanhuman

Predictions only

Length 887 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PIK3C3Q8NEB9 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC15.23■□□□□ 0.03
PIK3C3Q8NEB9 AC079781.3-201ENST00000449110 356 ntBASIC15.23■□□□□ 0.03
PIK3C3Q8NEB9 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC15.23■□□□□ 0.03
PIK3C3Q8NEB9 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC15.23■□□□□ 0.03
PIK3C3Q8NEB9 BSG-214ENST00000614867 960 ntTSL 3 BASIC15.23■□□□□ 0.03
PIK3C3Q8NEB9 TP73-AS1-207ENST00000624167 988 ntBASIC15.23■□□□□ 0.03
PIK3C3Q8NEB9 VPS51-217ENST00000639871 243 ntTSL 5 BASIC15.23■□□□□ 0.03
PIK3C3Q8NEB9 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
PIK3C3Q8NEB9 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
PIK3C3Q8NEB9 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
PIK3C3Q8NEB9 RER1-209ENST00000605895 3044 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
PIK3C3Q8NEB9 MEN1-207ENST00000377326 3150 ntAPPRIS ALT1 TSL 5 BASIC15.23■□□□□ 0.03
PIK3C3Q8NEB9 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
PIK3C3Q8NEB9 AC006504.4-201ENST00000592118 1568 ntBASIC15.23■□□□□ 0.03
PIK3C3Q8NEB9 SSR4P1-203ENST00000599569 2260 ntBASIC15.23■□□□□ 0.03
PIK3C3Q8NEB9 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC15.23■□□□□ 0.03
PIK3C3Q8NEB9 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC15.23■□□□□ 0.03
PIK3C3Q8NEB9 AL139423.1-201ENST00000606802 7923 ntTSL 5 BASIC15.23■□□□□ 0.03
PIK3C3Q8NEB9 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC15.23■□□□□ 0.03
PIK3C3Q8NEB9 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
PIK3C3Q8NEB9 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
PIK3C3Q8NEB9 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC15.22■□□□□ 0.03
PIK3C3Q8NEB9 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC15.22■□□□□ 0.03
PIK3C3Q8NEB9 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
PIK3C3Q8NEB9 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
PIK3C3Q8NEB9 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
PIK3C3Q8NEB9 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
PIK3C3Q8NEB9 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC15.22■□□□□ 0.03
PIK3C3Q8NEB9 CICP13-201ENST00000422015 2789 ntBASIC15.22■□□□□ 0.03
PIK3C3Q8NEB9 GPR153-201ENST00000377893 4082 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
PIK3C3Q8NEB9 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC15.22■□□□□ 0.03
PIK3C3Q8NEB9 DCTN1-203ENST00000409240 4365 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
PIK3C3Q8NEB9 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
PIK3C3Q8NEB9 SHH-201ENST00000297261 4454 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
PIK3C3Q8NEB9 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
PIK3C3Q8NEB9 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
PIK3C3Q8NEB9 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC15.22■□□□□ 0.03
PIK3C3Q8NEB9 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
PIK3C3Q8NEB9 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
PIK3C3Q8NEB9 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC15.22■□□□□ 0.03
PIK3C3Q8NEB9 MED22-202ENST00000371999 987 ntTSL 3 BASIC15.22■□□□□ 0.03
PIK3C3Q8NEB9 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC15.22■□□□□ 0.03
PIK3C3Q8NEB9 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC15.22■□□□□ 0.03
PIK3C3Q8NEB9 HCG4-201ENST00000418983 998 ntBASIC15.22■□□□□ 0.03
PIK3C3Q8NEB9 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC15.22■□□□□ 0.03
PIK3C3Q8NEB9 AC005412.3-201ENST00000580309 715 ntBASIC15.22■□□□□ 0.03
PIK3C3Q8NEB9 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
PIK3C3Q8NEB9 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC15.22■□□□□ 0.03
PIK3C3Q8NEB9 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC15.22■□□□□ 0.03
PIK3C3Q8NEB9 CALM3-211ENST00000598871 561 ntTSL 4 BASIC15.22■□□□□ 0.03
PIK3C3Q8NEB9 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC15.22■□□□□ 0.03
PIK3C3Q8NEB9 AL031008.1-201ENST00000619963 541 ntBASIC15.22■□□□□ 0.03
PIK3C3Q8NEB9 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
PIK3C3Q8NEB9 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC15.22■□□□□ 0.03
PIK3C3Q8NEB9 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC15.22■□□□□ 0.03
PIK3C3Q8NEB9 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC15.22■□□□□ 0.03
PIK3C3Q8NEB9 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
PIK3C3Q8NEB9 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC15.22■□□□□ 0.03
PIK3C3Q8NEB9 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
PIK3C3Q8NEB9 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
PIK3C3Q8NEB9 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC15.22■□□□□ 0.03
PIK3C3Q8NEB9 POU2F2-207ENST00000529067 2657 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
PIK3C3Q8NEB9 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
PIK3C3Q8NEB9 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
PIK3C3Q8NEB9 PAK4-208ENST00000599386 5735 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
PIK3C3Q8NEB9 FERMT3-201ENST00000279227 2489 ntAPPRIS P4 TSL 1 (best) BASIC15.22■□□□□ 0.03
PIK3C3Q8NEB9 FERMT3-202ENST00000345728 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC15.22■□□□□ 0.03
PIK3C3Q8NEB9 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
PIK3C3Q8NEB9 HNRNPU-204ENST00000440865 3207 ntTSL 2 BASIC15.22■□□□□ 0.03
PIK3C3Q8NEB9 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
PIK3C3Q8NEB9 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC15.22■□□□□ 0.03
PIK3C3Q8NEB9 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC15.22■□□□□ 0.03
PIK3C3Q8NEB9 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
PIK3C3Q8NEB9 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
PIK3C3Q8NEB9 IQCE-203ENST00000402050 6844 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
PIK3C3Q8NEB9 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
PIK3C3Q8NEB9 MIR600HG-201ENST00000449175 5984 ntBASIC15.21■□□□□ 0.03
PIK3C3Q8NEB9 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
PIK3C3Q8NEB9 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC15.21■□□□□ 0.03
PIK3C3Q8NEB9 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC15.21■□□□□ 0.03
PIK3C3Q8NEB9 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
PIK3C3Q8NEB9 PDP1-201ENST00000297598 4272 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
PIK3C3Q8NEB9 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC15.21■□□□□ 0.03
PIK3C3Q8NEB9 TTC28-AS1-219ENST00000454741 5064 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
PIK3C3Q8NEB9 CCDC50-201ENST00000392455 8429 ntAPPRIS ALT1 TSL 1 (best) BASIC15.21■□□□□ 0.03
PIK3C3Q8NEB9 EPS8L2-223ENST00000533256 3266 ntAPPRIS P2 TSL 5 BASIC15.21■□□□□ 0.03
PIK3C3Q8NEB9 WSCD1-201ENST00000317744 5819 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
PIK3C3Q8NEB9 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
PIK3C3Q8NEB9 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
PIK3C3Q8NEB9 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
PIK3C3Q8NEB9 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC15.21■□□□□ 0.03
PIK3C3Q8NEB9 RPS2P1-201ENST00000434010 821 ntBASIC15.21■□□□□ 0.03
PIK3C3Q8NEB9 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC15.21■□□□□ 0.03
PIK3C3Q8NEB9 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
PIK3C3Q8NEB9 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC15.21■□□□□ 0.03
PIK3C3Q8NEB9 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC15.21■□□□□ 0.03
PIK3C3Q8NEB9 AL160237.2-201ENST00000556165 472 ntBASIC15.21■□□□□ 0.03
PIK3C3Q8NEB9 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC15.21■□□□□ 0.03
PIK3C3Q8NEB9 PAM16-208ENST00000573553 722 ntTSL 2 BASIC15.21■□□□□ 0.03
PIK3C3Q8NEB9 CYGB-205ENST00000590175 830 ntTSL 3 BASIC15.21■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 93.3 ms