Protein–RNA interactions for Protein: Q8N7B9

EFCAB3, EF-hand calcium-binding domain-containing protein 3, humanhuman

Predictions only

Length 438 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB3Q8N7B9 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
EFCAB3Q8N7B9 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
EFCAB3Q8N7B9 BCAR1-207ENST00000538440 3192 ntAPPRIS ALT2 TSL 2 BASIC16.27■□□□□ 0.2
EFCAB3Q8N7B9 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
EFCAB3Q8N7B9 MTHFR-217ENST00000641820 1569 ntBASIC16.27■□□□□ 0.2
EFCAB3Q8N7B9 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
EFCAB3Q8N7B9 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
EFCAB3Q8N7B9 AC010931.2-202ENST00000514871 2566 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
EFCAB3Q8N7B9 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
EFCAB3Q8N7B9 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
EFCAB3Q8N7B9 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
EFCAB3Q8N7B9 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
EFCAB3Q8N7B9 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
EFCAB3Q8N7B9 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC16.27■□□□□ 0.2
EFCAB3Q8N7B9 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC16.27■□□□□ 0.2
EFCAB3Q8N7B9 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
EFCAB3Q8N7B9 NABP1-203ENST00000409510 843 ntTSL 5 BASIC16.27■□□□□ 0.2
EFCAB3Q8N7B9 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
EFCAB3Q8N7B9 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
EFCAB3Q8N7B9 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC16.27■□□□□ 0.2
EFCAB3Q8N7B9 AC079296.1-202ENST00000521394 960 ntTSL 4 BASIC16.27■□□□□ 0.2
EFCAB3Q8N7B9 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC16.27■□□□□ 0.2
EFCAB3Q8N7B9 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC16.27■□□□□ 0.2
EFCAB3Q8N7B9 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC16.27■□□□□ 0.2
EFCAB3Q8N7B9 AC010931.3-201ENST00000561647 554 ntTSL 3 BASIC16.27■□□□□ 0.2
EFCAB3Q8N7B9 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC16.27■□□□□ 0.2
EFCAB3Q8N7B9 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC16.27■□□□□ 0.2
EFCAB3Q8N7B9 AL353135.1-201ENST00000606729 504 ntBASIC16.27■□□□□ 0.2
EFCAB3Q8N7B9 AL023583.1-201ENST00000607518 1143 ntBASIC16.27■□□□□ 0.2
EFCAB3Q8N7B9 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC16.27■□□□□ 0.2
EFCAB3Q8N7B9 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC16.27■□□□□ 0.2
EFCAB3Q8N7B9 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
EFCAB3Q8N7B9 EPB41L3-202ENST00000342933 4270 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
EFCAB3Q8N7B9 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
EFCAB3Q8N7B9 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.19
EFCAB3Q8N7B9 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC16.27■□□□□ 0.19
EFCAB3Q8N7B9 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC16.27■□□□□ 0.19
EFCAB3Q8N7B9 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
EFCAB3Q8N7B9 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC16.27■□□□□ 0.19
EFCAB3Q8N7B9 FAM219A-206ENST00000379087 3573 ntAPPRIS ALT1 TSL 4 BASIC16.27■□□□□ 0.19
EFCAB3Q8N7B9 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.19
EFCAB3Q8N7B9 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC16.27■□□□□ 0.19
EFCAB3Q8N7B9 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
EFCAB3Q8N7B9 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
EFCAB3Q8N7B9 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
EFCAB3Q8N7B9 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
EFCAB3Q8N7B9 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
EFCAB3Q8N7B9 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
EFCAB3Q8N7B9 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
EFCAB3Q8N7B9 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
EFCAB3Q8N7B9 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
EFCAB3Q8N7B9 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
EFCAB3Q8N7B9 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
EFCAB3Q8N7B9 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
EFCAB3Q8N7B9 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
EFCAB3Q8N7B9 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
EFCAB3Q8N7B9 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC16.26■□□□□ 0.19
EFCAB3Q8N7B9 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
EFCAB3Q8N7B9 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
EFCAB3Q8N7B9 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC16.26■□□□□ 0.19
EFCAB3Q8N7B9 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC16.26■□□□□ 0.19
EFCAB3Q8N7B9 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC16.26■□□□□ 0.19
EFCAB3Q8N7B9 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
EFCAB3Q8N7B9 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC16.26■□□□□ 0.19
EFCAB3Q8N7B9 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
EFCAB3Q8N7B9 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC16.26■□□□□ 0.19
EFCAB3Q8N7B9 LAGE3P1-201ENST00000425356 484 ntBASIC16.26■□□□□ 0.19
EFCAB3Q8N7B9 DEFT1P-201ENST00000453425 496 ntBASIC16.26■□□□□ 0.19
EFCAB3Q8N7B9 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC16.26■□□□□ 0.19
EFCAB3Q8N7B9 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC16.26■□□□□ 0.19
EFCAB3Q8N7B9 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC16.26■□□□□ 0.19
EFCAB3Q8N7B9 PRDM2-213ENST00000503842 705 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
EFCAB3Q8N7B9 AC010387.1-201ENST00000507526 487 ntTSL 2 BASIC16.26■□□□□ 0.19
EFCAB3Q8N7B9 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC16.26■□□□□ 0.19
EFCAB3Q8N7B9 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC16.26■□□□□ 0.19
EFCAB3Q8N7B9 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC16.26■□□□□ 0.19
EFCAB3Q8N7B9 AC129507.2-201ENST00000572499 748 ntTSL 3 BASIC16.26■□□□□ 0.19
EFCAB3Q8N7B9 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC16.26■□□□□ 0.19
EFCAB3Q8N7B9 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC16.26■□□□□ 0.19
EFCAB3Q8N7B9 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC16.26■□□□□ 0.19
EFCAB3Q8N7B9 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
EFCAB3Q8N7B9 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC16.26■□□□□ 0.19
EFCAB3Q8N7B9 AC107918.4-202ENST00000641623 219 ntBASIC16.26■□□□□ 0.19
EFCAB3Q8N7B9 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
EFCAB3Q8N7B9 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
EFCAB3Q8N7B9 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC16.26■□□□□ 0.19
EFCAB3Q8N7B9 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
EFCAB3Q8N7B9 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
EFCAB3Q8N7B9 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
EFCAB3Q8N7B9 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
EFCAB3Q8N7B9 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
EFCAB3Q8N7B9 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
EFCAB3Q8N7B9 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
EFCAB3Q8N7B9 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
EFCAB3Q8N7B9 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
EFCAB3Q8N7B9 AL596087.1-201ENST00000400979 1969 ntBASIC16.26■□□□□ 0.19
EFCAB3Q8N7B9 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC16.26■□□□□ 0.19
EFCAB3Q8N7B9 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC16.26■□□□□ 0.19
EFCAB3Q8N7B9 AC083899.2-201ENST00000423285 1376 ntBASIC16.26■□□□□ 0.19
EFCAB3Q8N7B9 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC16.26■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 40.9 ms