Protein–RNA interactions for Protein: Q8N4Z0

RAB42, Putative Ras-related protein Rab-42, humanhuman

Predictions only

Length 105 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB42Q8N4Z0 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
RAB42Q8N4Z0 AL512356.2-201ENST00000546955 174 ntBASIC15.74■□□□□ 0.11
RAB42Q8N4Z0 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC15.74■□□□□ 0.11
RAB42Q8N4Z0 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC15.74■□□□□ 0.11
RAB42Q8N4Z0 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC15.74■□□□□ 0.11
RAB42Q8N4Z0 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC15.74■□□□□ 0.11
RAB42Q8N4Z0 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC15.74■□□□□ 0.11
RAB42Q8N4Z0 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC15.74■□□□□ 0.11
RAB42Q8N4Z0 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
RAB42Q8N4Z0 AC092364.2-201ENST00000596710 2692 ntBASIC15.74■□□□□ 0.11
RAB42Q8N4Z0 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC15.74■□□□□ 0.11
RAB42Q8N4Z0 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
RAB42Q8N4Z0 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
RAB42Q8N4Z0 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
RAB42Q8N4Z0 WT1-209ENST00000530998 2421 ntTSL 2 BASIC15.74■□□□□ 0.11
RAB42Q8N4Z0 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC15.74■□□□□ 0.11
RAB42Q8N4Z0 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC15.74■□□□□ 0.11
RAB42Q8N4Z0 OPA1-204ENST00000361828 6381 ntAPPRIS ALT1 TSL 5 BASIC15.74■□□□□ 0.11
RAB42Q8N4Z0 AL035456.1-201ENST00000456064 1369 ntBASIC15.74■□□□□ 0.11
RAB42Q8N4Z0 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC15.74■□□□□ 0.11
RAB42Q8N4Z0 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
RAB42Q8N4Z0 SEC63-201ENST00000369002 6411 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
RAB42Q8N4Z0 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
RAB42Q8N4Z0 AFF4-201ENST00000265343 9552 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
RAB42Q8N4Z0 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC15.73■□□□□ 0.11
RAB42Q8N4Z0 SBF1-201ENST00000348911 6045 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
RAB42Q8N4Z0 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
RAB42Q8N4Z0 GDF11-201ENST00000257868 8657 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
RAB42Q8N4Z0 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC15.73■□□□□ 0.11
RAB42Q8N4Z0 KRT18P28-201ENST00000453838 1332 ntBASIC15.73■□□□□ 0.11
RAB42Q8N4Z0 AL596087.1-201ENST00000400979 1969 ntBASIC15.73■□□□□ 0.11
RAB42Q8N4Z0 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
RAB42Q8N4Z0 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC15.73■□□□□ 0.11
RAB42Q8N4Z0 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
RAB42Q8N4Z0 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
RAB42Q8N4Z0 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
RAB42Q8N4Z0 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
RAB42Q8N4Z0 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
RAB42Q8N4Z0 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC15.73■□□□□ 0.11
RAB42Q8N4Z0 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC15.73■□□□□ 0.11
RAB42Q8N4Z0 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC15.73■□□□□ 0.11
RAB42Q8N4Z0 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
RAB42Q8N4Z0 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC15.73■□□□□ 0.11
RAB42Q8N4Z0 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC15.73■□□□□ 0.11
RAB42Q8N4Z0 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC15.73■□□□□ 0.11
RAB42Q8N4Z0 AL139010.1-201ENST00000454878 894 ntBASIC15.73■□□□□ 0.11
RAB42Q8N4Z0 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
RAB42Q8N4Z0 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
RAB42Q8N4Z0 AC243562.2-201ENST00000561247 970 ntBASIC15.73■□□□□ 0.11
RAB42Q8N4Z0 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
RAB42Q8N4Z0 LSM12-202ENST00000585388 942 ntTSL 3 BASIC15.73■□□□□ 0.11
RAB42Q8N4Z0 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
RAB42Q8N4Z0 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC15.73■□□□□ 0.11
RAB42Q8N4Z0 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC15.73■□□□□ 0.11
RAB42Q8N4Z0 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
RAB42Q8N4Z0 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC15.73■□□□□ 0.11
RAB42Q8N4Z0 ADAMTS15-201ENST00000299164 5673 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
RAB42Q8N4Z0 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
RAB42Q8N4Z0 AL662844.4-201ENST00000606367 2838 ntBASIC15.73■□□□□ 0.11
RAB42Q8N4Z0 IRGQ-201ENST00000422989 9685 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
RAB42Q8N4Z0 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
RAB42Q8N4Z0 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC15.73■□□□□ 0.11
RAB42Q8N4Z0 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
RAB42Q8N4Z0 SMARCA2-214ENST00000450198 5602 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
RAB42Q8N4Z0 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC15.73■□□□□ 0.11
RAB42Q8N4Z0 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
RAB42Q8N4Z0 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
RAB42Q8N4Z0 ADAMTS2-201ENST00000251582 6754 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
RAB42Q8N4Z0 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
RAB42Q8N4Z0 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC15.72■□□□□ 0.11
RAB42Q8N4Z0 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
RAB42Q8N4Z0 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
RAB42Q8N4Z0 DYSF-201ENST00000258104 6796 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
RAB42Q8N4Z0 DYSF-204ENST00000409582 6790 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
RAB42Q8N4Z0 DYSF-210ENST00000413539 6769 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
RAB42Q8N4Z0 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC15.72■□□□□ 0.11
RAB42Q8N4Z0 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
RAB42Q8N4Z0 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
RAB42Q8N4Z0 SEC16A-202ENST00000290037 8982 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
RAB42Q8N4Z0 TBC1D16-209ENST00000576768 6342 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
RAB42Q8N4Z0 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC15.72■□□□□ 0.11
RAB42Q8N4Z0 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
RAB42Q8N4Z0 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
RAB42Q8N4Z0 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
RAB42Q8N4Z0 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC15.72■□□□□ 0.11
RAB42Q8N4Z0 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC15.72■□□□□ 0.11
RAB42Q8N4Z0 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC15.72■□□□□ 0.11
RAB42Q8N4Z0 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
RAB42Q8N4Z0 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
RAB42Q8N4Z0 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
RAB42Q8N4Z0 TNS2-201ENST00000314250 5010 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
RAB42Q8N4Z0 CUL3-201ENST00000264414 6741 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
RAB42Q8N4Z0 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
RAB42Q8N4Z0 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
RAB42Q8N4Z0 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
RAB42Q8N4Z0 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
RAB42Q8N4Z0 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
RAB42Q8N4Z0 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
RAB42Q8N4Z0 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC15.72■□□□□ 0.11
RAB42Q8N4Z0 GPS2P2-201ENST00000430745 888 ntBASIC15.72■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 52 ms