Protein–RNA interactions for Protein: Q8N3S3

PHTF2, Putative homeodomain transcription factor 2, humanhuman

Predictions only

Length 785 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHTF2Q8N3S3 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
PHTF2Q8N3S3 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
PHTF2Q8N3S3 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
PHTF2Q8N3S3 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
PHTF2Q8N3S3 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
PHTF2Q8N3S3 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC16.71■□□□□ 0.27
PHTF2Q8N3S3 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC16.71■□□□□ 0.27
PHTF2Q8N3S3 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC16.71■□□□□ 0.27
PHTF2Q8N3S3 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
PHTF2Q8N3S3 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC16.71■□□□□ 0.27
PHTF2Q8N3S3 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC16.71■□□□□ 0.27
PHTF2Q8N3S3 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC16.71■□□□□ 0.27
PHTF2Q8N3S3 GAPDHP21-201ENST00000450301 1010 ntBASIC16.71■□□□□ 0.27
PHTF2Q8N3S3 AL451067.1-201ENST00000453111 394 ntTSL 2 BASIC16.71■□□□□ 0.27
PHTF2Q8N3S3 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
PHTF2Q8N3S3 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC16.71■□□□□ 0.27
PHTF2Q8N3S3 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC16.71■□□□□ 0.27
PHTF2Q8N3S3 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC16.71■□□□□ 0.27
PHTF2Q8N3S3 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC16.71■□□□□ 0.27
PHTF2Q8N3S3 AC061975.2-201ENST00000581722 295 ntBASIC16.71■□□□□ 0.27
PHTF2Q8N3S3 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC16.71■□□□□ 0.27
PHTF2Q8N3S3 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
PHTF2Q8N3S3 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC16.71■□□□□ 0.27
PHTF2Q8N3S3 CROCCP1-201ENST00000426910 5675 ntBASIC16.71■□□□□ 0.27
PHTF2Q8N3S3 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
PHTF2Q8N3S3 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
PHTF2Q8N3S3 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
PHTF2Q8N3S3 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC16.71■□□□□ 0.27
PHTF2Q8N3S3 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC16.71■□□□□ 0.27
PHTF2Q8N3S3 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
PHTF2Q8N3S3 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
PHTF2Q8N3S3 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
PHTF2Q8N3S3 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
PHTF2Q8N3S3 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
PHTF2Q8N3S3 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.26
PHTF2Q8N3S3 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC16.71■□□□□ 0.26
PHTF2Q8N3S3 AC063926.2-201ENST00000623766 1308 ntBASIC16.7■□□□□ 0.26
PHTF2Q8N3S3 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
PHTF2Q8N3S3 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
PHTF2Q8N3S3 AL589702.1-201ENST00000641229 1509 ntBASIC16.7■□□□□ 0.26
PHTF2Q8N3S3 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC16.7■□□□□ 0.26
PHTF2Q8N3S3 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC16.7■□□□□ 0.26
PHTF2Q8N3S3 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
PHTF2Q8N3S3 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
PHTF2Q8N3S3 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
PHTF2Q8N3S3 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
PHTF2Q8N3S3 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC16.7■□□□□ 0.26
PHTF2Q8N3S3 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC16.7■□□□□ 0.26
PHTF2Q8N3S3 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
PHTF2Q8N3S3 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
PHTF2Q8N3S3 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
PHTF2Q8N3S3 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
PHTF2Q8N3S3 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
PHTF2Q8N3S3 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
PHTF2Q8N3S3 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC16.7■□□□□ 0.26
PHTF2Q8N3S3 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
PHTF2Q8N3S3 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC16.7■□□□□ 0.26
PHTF2Q8N3S3 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
PHTF2Q8N3S3 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
PHTF2Q8N3S3 RBM39-205ENST00000397370 612 ntTSL 2 BASIC16.7■□□□□ 0.26
PHTF2Q8N3S3 SELENOM-201ENST00000400299 694 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
PHTF2Q8N3S3 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
PHTF2Q8N3S3 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC16.7■□□□□ 0.26
PHTF2Q8N3S3 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC16.7■□□□□ 0.26
PHTF2Q8N3S3 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC16.7■□□□□ 0.26
PHTF2Q8N3S3 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC16.7■□□□□ 0.26
PHTF2Q8N3S3 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC16.7■□□□□ 0.26
PHTF2Q8N3S3 COQ6-210ENST00000554920 649 ntTSL 3 BASIC16.7■□□□□ 0.26
PHTF2Q8N3S3 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC16.7■□□□□ 0.26
PHTF2Q8N3S3 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC16.7■□□□□ 0.26
PHTF2Q8N3S3 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC16.7■□□□□ 0.26
PHTF2Q8N3S3 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC16.7■□□□□ 0.26
PHTF2Q8N3S3 AC020765.3-201ENST00000613051 740 ntBASIC16.7■□□□□ 0.26
PHTF2Q8N3S3 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC16.7■□□□□ 0.26
PHTF2Q8N3S3 AL662799.1-202ENST00000614205 422 ntBASIC16.7■□□□□ 0.26
PHTF2Q8N3S3 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC16.7■□□□□ 0.26
PHTF2Q8N3S3 AC025048.6-201ENST00000634326 1161 ntBASIC16.7■□□□□ 0.26
PHTF2Q8N3S3 AC004840.1-201ENST00000636359 365 ntBASIC16.7■□□□□ 0.26
PHTF2Q8N3S3 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
PHTF2Q8N3S3 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
PHTF2Q8N3S3 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
PHTF2Q8N3S3 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
PHTF2Q8N3S3 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
PHTF2Q8N3S3 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
PHTF2Q8N3S3 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
PHTF2Q8N3S3 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
PHTF2Q8N3S3 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
PHTF2Q8N3S3 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
PHTF2Q8N3S3 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC16.7■□□□□ 0.26
PHTF2Q8N3S3 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
PHTF2Q8N3S3 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
PHTF2Q8N3S3 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
PHTF2Q8N3S3 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC16.69■□□□□ 0.26
PHTF2Q8N3S3 HLA-A-202ENST00000376806 1854 ntBASIC16.69■□□□□ 0.26
PHTF2Q8N3S3 AMT-206ENST00000458307 1860 ntTSL 2 BASIC16.69■□□□□ 0.26
PHTF2Q8N3S3 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
PHTF2Q8N3S3 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
PHTF2Q8N3S3 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
PHTF2Q8N3S3 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
PHTF2Q8N3S3 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms