Protein–RNA interactions for Protein: Q8IWZ4

TRIM48, Tripartite motif-containing protein 48, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48Q8IWZ4 GNB4-201ENST00000232564 6434 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
TRIM48Q8IWZ4 U82695.1-201ENST00000635752 1889 ntBASIC15.91■□□□□ 0.14
TRIM48Q8IWZ4 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
TRIM48Q8IWZ4 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
TRIM48Q8IWZ4 ITGAV-201ENST00000261023 7030 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
TRIM48Q8IWZ4 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
TRIM48Q8IWZ4 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC15.9■□□□□ 0.14
TRIM48Q8IWZ4 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC15.9■□□□□ 0.14
TRIM48Q8IWZ4 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
TRIM48Q8IWZ4 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC15.9■□□□□ 0.14
TRIM48Q8IWZ4 AL035456.1-201ENST00000456064 1369 ntBASIC15.9■□□□□ 0.14
TRIM48Q8IWZ4 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC15.9■□□□□ 0.14
TRIM48Q8IWZ4 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC15.9■□□□□ 0.14
TRIM48Q8IWZ4 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
TRIM48Q8IWZ4 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC15.9■□□□□ 0.14
TRIM48Q8IWZ4 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
TRIM48Q8IWZ4 INGX-202ENST00000489074 768 ntBASIC15.9■□□□□ 0.14
TRIM48Q8IWZ4 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC15.9■□□□□ 0.14
TRIM48Q8IWZ4 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC15.9■□□□□ 0.14
TRIM48Q8IWZ4 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC15.9■□□□□ 0.14
TRIM48Q8IWZ4 AL158211.3-201ENST00000607385 239 ntBASIC15.9■□□□□ 0.14
TRIM48Q8IWZ4 TAP2-201ENST00000374897 5684 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
TRIM48Q8IWZ4 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC15.9■□□□□ 0.14
TRIM48Q8IWZ4 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
TRIM48Q8IWZ4 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
TRIM48Q8IWZ4 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
TRIM48Q8IWZ4 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
TRIM48Q8IWZ4 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
TRIM48Q8IWZ4 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
TRIM48Q8IWZ4 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
TRIM48Q8IWZ4 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
TRIM48Q8IWZ4 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC15.9■□□□□ 0.14
TRIM48Q8IWZ4 TGOLN2-203ENST00000398263 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
TRIM48Q8IWZ4 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
TRIM48Q8IWZ4 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC15.9■□□□□ 0.14
TRIM48Q8IWZ4 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC15.9■□□□□ 0.14
TRIM48Q8IWZ4 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
TRIM48Q8IWZ4 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
TRIM48Q8IWZ4 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
TRIM48Q8IWZ4 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC15.89■□□□□ 0.13
TRIM48Q8IWZ4 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
TRIM48Q8IWZ4 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
TRIM48Q8IWZ4 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
TRIM48Q8IWZ4 CCP110-201ENST00000381396 5446 ntAPPRIS ALT1 TSL 1 (best) BASIC15.89■□□□□ 0.13
TRIM48Q8IWZ4 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
TRIM48Q8IWZ4 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
TRIM48Q8IWZ4 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
TRIM48Q8IWZ4 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
TRIM48Q8IWZ4 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC15.89■□□□□ 0.13
TRIM48Q8IWZ4 HNRNPA1P40-201ENST00000426371 1278 ntBASIC15.89■□□□□ 0.13
TRIM48Q8IWZ4 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC15.89■□□□□ 0.13
TRIM48Q8IWZ4 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC15.89■□□□□ 0.13
TRIM48Q8IWZ4 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC15.89■□□□□ 0.13
TRIM48Q8IWZ4 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
TRIM48Q8IWZ4 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
TRIM48Q8IWZ4 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC15.89■□□□□ 0.13
TRIM48Q8IWZ4 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
TRIM48Q8IWZ4 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
TRIM48Q8IWZ4 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC15.89■□□□□ 0.13
TRIM48Q8IWZ4 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
TRIM48Q8IWZ4 AC092364.2-202ENST00000597012 1073 ntBASIC15.89■□□□□ 0.13
TRIM48Q8IWZ4 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC15.89■□□□□ 0.13
TRIM48Q8IWZ4 AC073592.8-201ENST00000624126 511 ntBASIC15.89■□□□□ 0.13
TRIM48Q8IWZ4 LINC02199-201ENST00000506655 2702 ntBASIC15.89■□□□□ 0.13
TRIM48Q8IWZ4 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
TRIM48Q8IWZ4 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC15.89■□□□□ 0.13
TRIM48Q8IWZ4 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
TRIM48Q8IWZ4 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
TRIM48Q8IWZ4 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
TRIM48Q8IWZ4 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
TRIM48Q8IWZ4 NHS-201ENST00000380060 8761 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
TRIM48Q8IWZ4 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
TRIM48Q8IWZ4 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
TRIM48Q8IWZ4 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
TRIM48Q8IWZ4 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
TRIM48Q8IWZ4 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
TRIM48Q8IWZ4 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
TRIM48Q8IWZ4 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
TRIM48Q8IWZ4 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
TRIM48Q8IWZ4 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC15.89■□□□□ 0.13
TRIM48Q8IWZ4 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
TRIM48Q8IWZ4 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
TRIM48Q8IWZ4 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC15.89■□□□□ 0.13
TRIM48Q8IWZ4 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC15.88■□□□□ 0.13
TRIM48Q8IWZ4 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC15.88■□□□□ 0.13
TRIM48Q8IWZ4 CARD10-201ENST00000251973 3934 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
TRIM48Q8IWZ4 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
TRIM48Q8IWZ4 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
TRIM48Q8IWZ4 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC15.88■□□□□ 0.13
TRIM48Q8IWZ4 JMJD1C-202ENST00000399262 8666 ntAPPRIS P3 TSL 5 BASIC15.88■□□□□ 0.13
TRIM48Q8IWZ4 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
TRIM48Q8IWZ4 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC15.88■□□□□ 0.13
TRIM48Q8IWZ4 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC15.88■□□□□ 0.13
TRIM48Q8IWZ4 STAT5B-201ENST00000293328 5103 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
TRIM48Q8IWZ4 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
TRIM48Q8IWZ4 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
TRIM48Q8IWZ4 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
TRIM48Q8IWZ4 DOC2GP-204ENST00000639052 2548 ntBASIC15.88■□□□□ 0.13
TRIM48Q8IWZ4 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
TRIM48Q8IWZ4 PCDHA1-201ENST00000378133 2726 ntBASIC15.88■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 31 ms