Protein–RNA interactions for Protein: Q8IUM7

NPAS4, Neuronal PAS domain-containing protein 4, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS4Q8IUM7 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC17.15■□□□□ 0.34
NPAS4Q8IUM7 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC17.15■□□□□ 0.34
NPAS4Q8IUM7 PHKG1P2-201ENST00000457537 863 ntBASIC17.15■□□□□ 0.34
NPAS4Q8IUM7 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC17.15■□□□□ 0.34
NPAS4Q8IUM7 AC068587.3-201ENST00000526613 355 ntBASIC17.15■□□□□ 0.34
NPAS4Q8IUM7 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC17.15■□□□□ 0.34
NPAS4Q8IUM7 AL122035.1-201ENST00000556640 550 ntTSL 2 BASIC17.15■□□□□ 0.34
NPAS4Q8IUM7 ZNF180-204ENST00000586637 1023 ntTSL 5 BASIC17.15■□□□□ 0.34
NPAS4Q8IUM7 AC011497.1-201ENST00000596781 561 ntTSL 4 BASIC17.15■□□□□ 0.34
NPAS4Q8IUM7 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC17.15■□□□□ 0.34
NPAS4Q8IUM7 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
NPAS4Q8IUM7 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
NPAS4Q8IUM7 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
NPAS4Q8IUM7 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC17.15■□□□□ 0.34
NPAS4Q8IUM7 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
NPAS4Q8IUM7 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC17.15■□□□□ 0.34
NPAS4Q8IUM7 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC17.15■□□□□ 0.34
NPAS4Q8IUM7 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC17.15■□□□□ 0.34
NPAS4Q8IUM7 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC17.14■□□□□ 0.34
NPAS4Q8IUM7 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC17.14■□□□□ 0.34
NPAS4Q8IUM7 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
NPAS4Q8IUM7 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC17.14■□□□□ 0.33
NPAS4Q8IUM7 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
NPAS4Q8IUM7 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
NPAS4Q8IUM7 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
NPAS4Q8IUM7 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
NPAS4Q8IUM7 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
NPAS4Q8IUM7 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
NPAS4Q8IUM7 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC17.14■□□□□ 0.33
NPAS4Q8IUM7 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
NPAS4Q8IUM7 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
NPAS4Q8IUM7 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC17.14■□□□□ 0.33
NPAS4Q8IUM7 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
NPAS4Q8IUM7 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
NPAS4Q8IUM7 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
NPAS4Q8IUM7 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
NPAS4Q8IUM7 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
NPAS4Q8IUM7 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC17.14■□□□□ 0.33
NPAS4Q8IUM7 RHCE-205ENST00000349438 1235 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
NPAS4Q8IUM7 MBP-203ENST00000359645 1255 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
NPAS4Q8IUM7 Z82214.2-201ENST00000420269 531 ntTSL 4 BASIC17.14■□□□□ 0.33
NPAS4Q8IUM7 ACTBP11-201ENST00000436287 1126 ntBASIC17.14■□□□□ 0.33
NPAS4Q8IUM7 BCRP2-202ENST00000447763 634 ntBASIC17.14■□□□□ 0.33
NPAS4Q8IUM7 SYNPR-202ENST00000450542 1004 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
NPAS4Q8IUM7 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC17.14■□□□□ 0.33
NPAS4Q8IUM7 FAM25G-201ENST00000452267 345 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
NPAS4Q8IUM7 CHMP2B-205ENST00000494980 1175 ntTSL 3 BASIC17.14■□□□□ 0.33
NPAS4Q8IUM7 BCRP6-201ENST00000510112 632 ntBASIC17.14■□□□□ 0.33
NPAS4Q8IUM7 BCRP7-201ENST00000511549 544 ntBASIC17.14■□□□□ 0.33
NPAS4Q8IUM7 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
NPAS4Q8IUM7 AC120045.2-201ENST00000567334 178 ntBASIC17.14■□□□□ 0.33
NPAS4Q8IUM7 SPECC1-223ENST00000584527 940 ntTSL 3 BASIC17.14■□□□□ 0.33
NPAS4Q8IUM7 LINC01887-202ENST00000584734 860 ntTSL 3 BASIC17.14■□□□□ 0.33
NPAS4Q8IUM7 AL049840.4-201ENST00000602422 811 ntBASIC17.14■□□□□ 0.33
NPAS4Q8IUM7 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
NPAS4Q8IUM7 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC17.14■□□□□ 0.33
NPAS4Q8IUM7 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC17.14■□□□□ 0.33
NPAS4Q8IUM7 ARFIP1-202ENST00000356064 1302 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
NPAS4Q8IUM7 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
NPAS4Q8IUM7 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
NPAS4Q8IUM7 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
NPAS4Q8IUM7 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
NPAS4Q8IUM7 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
NPAS4Q8IUM7 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
NPAS4Q8IUM7 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
NPAS4Q8IUM7 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC17.13■□□□□ 0.33
NPAS4Q8IUM7 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC17.13■□□□□ 0.33
NPAS4Q8IUM7 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC17.13■□□□□ 0.33
NPAS4Q8IUM7 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC17.13■□□□□ 0.33
NPAS4Q8IUM7 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
NPAS4Q8IUM7 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
NPAS4Q8IUM7 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
NPAS4Q8IUM7 NINJ2-201ENST00000305108 1252 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
NPAS4Q8IUM7 TRMT112-201ENST00000308774 561 ntAPPRIS ALT1 TSL 2 BASIC17.13■□□□□ 0.33
NPAS4Q8IUM7 OR10H1-201ENST00000334920 1124 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
NPAS4Q8IUM7 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
NPAS4Q8IUM7 UBE2T-201ENST00000367274 922 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
NPAS4Q8IUM7 CDKN1A-202ENST00000373711 793 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
NPAS4Q8IUM7 C1QBPP1-201ENST00000400117 770 ntBASIC17.13■□□□□ 0.33
NPAS4Q8IUM7 AC099336.1-201ENST00000417053 1171 ntBASIC17.13■□□□□ 0.33
NPAS4Q8IUM7 AC136604.1-201ENST00000418535 575 ntBASIC17.13■□□□□ 0.33
NPAS4Q8IUM7 USB1-202ENST00000423271 1217 ntTSL 2 BASIC17.13■□□□□ 0.33
NPAS4Q8IUM7 RBM24-203ENST00000425446 1034 ntTSL 3 BASIC17.13■□□□□ 0.33
NPAS4Q8IUM7 RPL28-203ENST00000428193 573 ntTSL 2 BASIC17.13■□□□□ 0.33
NPAS4Q8IUM7 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
NPAS4Q8IUM7 AL355864.2-201ENST00000447420 863 ntBASIC17.13■□□□□ 0.33
NPAS4Q8IUM7 AL356489.1-201ENST00000449144 1144 ntTSL 3 BASIC17.13■□□□□ 0.33
NPAS4Q8IUM7 STARD4-205ENST00000505803 803 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
NPAS4Q8IUM7 STARD4-207ENST00000509887 1186 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
NPAS4Q8IUM7 SPDYE16-201ENST00000515340 858 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
NPAS4Q8IUM7 OSGIN2-203ENST00000520659 801 ntTSL 2 BASIC17.13■□□□□ 0.33
NPAS4Q8IUM7 AP001889.1-201ENST00000525414 633 ntBASIC17.13■□□□□ 0.33
NPAS4Q8IUM7 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC17.13■□□□□ 0.33
NPAS4Q8IUM7 RCN1-210ENST00000532942 1191 ntAPPRIS ALT2 TSL 2 BASIC17.13■□□□□ 0.33
NPAS4Q8IUM7 AL583810.1-201ENST00000553344 1045 ntBASIC17.13■□□□□ 0.33
NPAS4Q8IUM7 RPL28-207ENST00000558815 616 ntTSL 2 BASIC17.13■□□□□ 0.33
NPAS4Q8IUM7 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC17.13■□□□□ 0.33
NPAS4Q8IUM7 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC17.13■□□□□ 0.33
NPAS4Q8IUM7 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC17.13■□□□□ 0.33
NPAS4Q8IUM7 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC17.13■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 52.5 ms