Protein–RNA interactions for Protein: Q86XT4

TRIM50, E3 ubiquitin-protein ligase TRIM50, humanhuman

Predictions only

Length 487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM50Q86XT4 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
TRIM50Q86XT4 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
TRIM50Q86XT4 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC17.96■□□□□ 0.47
TRIM50Q86XT4 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC17.96■□□□□ 0.47
TRIM50Q86XT4 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
TRIM50Q86XT4 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC17.96■□□□□ 0.47
TRIM50Q86XT4 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC17.96■□□□□ 0.46
TRIM50Q86XT4 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC17.96■□□□□ 0.46
TRIM50Q86XT4 NFIC-211ENST00000641145 8399 ntBASIC17.96■□□□□ 0.46
TRIM50Q86XT4 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC17.95■□□□□ 0.46
TRIM50Q86XT4 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
TRIM50Q86XT4 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
TRIM50Q86XT4 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
TRIM50Q86XT4 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
TRIM50Q86XT4 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
TRIM50Q86XT4 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
TRIM50Q86XT4 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
TRIM50Q86XT4 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC17.95■□□□□ 0.46
TRIM50Q86XT4 SLC7A15P-201ENST00000424028 1363 ntBASIC17.95■□□□□ 0.46
TRIM50Q86XT4 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC17.95■□□□□ 0.46
TRIM50Q86XT4 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
TRIM50Q86XT4 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
TRIM50Q86XT4 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
TRIM50Q86XT4 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
TRIM50Q86XT4 AD000864.1-201ENST00000624076 2295 ntBASIC17.95■□□□□ 0.46
TRIM50Q86XT4 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC17.95■□□□□ 0.46
TRIM50Q86XT4 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
TRIM50Q86XT4 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
TRIM50Q86XT4 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
TRIM50Q86XT4 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC17.95■□□□□ 0.46
TRIM50Q86XT4 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
TRIM50Q86XT4 SS18L2-201ENST00000011691 781 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
TRIM50Q86XT4 GK-202ENST00000378941 458 ntTSL 3 BASIC17.95■□□□□ 0.46
TRIM50Q86XT4 AC244107.1-201ENST00000442033 332 ntBASIC17.95■□□□□ 0.46
TRIM50Q86XT4 LINC00473-201ENST00000444465 798 ntTSL 3 BASIC17.95■□□□□ 0.46
TRIM50Q86XT4 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
TRIM50Q86XT4 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
TRIM50Q86XT4 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC17.95■□□□□ 0.46
TRIM50Q86XT4 AP003068.1-201ENST00000528887 544 ntTSL 4 BASIC17.95■□□□□ 0.46
TRIM50Q86XT4 TPRX2P-201ENST00000535362 881 ntBASIC17.95■□□□□ 0.46
TRIM50Q86XT4 CR383656.12-201ENST00000549567 513 ntBASIC17.95■□□□□ 0.46
TRIM50Q86XT4 AC005544.2-201ENST00000579138 229 ntTSL 5 BASIC17.95■□□□□ 0.46
TRIM50Q86XT4 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC17.95■□□□□ 0.46
TRIM50Q86XT4 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
TRIM50Q86XT4 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
TRIM50Q86XT4 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
TRIM50Q86XT4 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC17.95■□□□□ 0.46
TRIM50Q86XT4 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
TRIM50Q86XT4 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
TRIM50Q86XT4 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
TRIM50Q86XT4 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC17.95■□□□□ 0.46
TRIM50Q86XT4 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
TRIM50Q86XT4 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
TRIM50Q86XT4 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
TRIM50Q86XT4 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC17.95■□□□□ 0.46
TRIM50Q86XT4 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC17.95■□□□□ 0.46
TRIM50Q86XT4 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC17.95■□□□□ 0.46
TRIM50Q86XT4 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
TRIM50Q86XT4 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
TRIM50Q86XT4 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC17.95■□□□□ 0.46
TRIM50Q86XT4 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
TRIM50Q86XT4 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
TRIM50Q86XT4 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
TRIM50Q86XT4 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
TRIM50Q86XT4 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
TRIM50Q86XT4 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
TRIM50Q86XT4 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
TRIM50Q86XT4 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC17.94■□□□□ 0.46
TRIM50Q86XT4 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
TRIM50Q86XT4 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
TRIM50Q86XT4 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
TRIM50Q86XT4 VHLL-201ENST00000339922 676 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
TRIM50Q86XT4 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
TRIM50Q86XT4 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC17.94■□□□□ 0.46
TRIM50Q86XT4 AC068898.1-201ENST00000440750 335 ntTSL 3 BASIC17.94■□□□□ 0.46
TRIM50Q86XT4 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
TRIM50Q86XT4 RAB3A-202ENST00000464076 1253 ntTSL 2 BASIC17.94■□□□□ 0.46
TRIM50Q86XT4 NAA50-208ENST00000497255 789 ntTSL 5 BASIC17.94■□□□□ 0.46
TRIM50Q86XT4 FTH1-202ENST00000526640 786 ntTSL 2 BASIC17.94■□□□□ 0.46
TRIM50Q86XT4 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC17.94■□□□□ 0.46
TRIM50Q86XT4 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC17.94■□□□□ 0.46
TRIM50Q86XT4 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC17.94■□□□□ 0.46
TRIM50Q86XT4 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC17.94■□□□□ 0.46
TRIM50Q86XT4 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
TRIM50Q86XT4 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
TRIM50Q86XT4 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
TRIM50Q86XT4 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC17.94■□□□□ 0.46
TRIM50Q86XT4 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
TRIM50Q86XT4 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC17.94■□□□□ 0.46
TRIM50Q86XT4 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC17.94■□□□□ 0.46
TRIM50Q86XT4 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC17.94■□□□□ 0.46
TRIM50Q86XT4 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
TRIM50Q86XT4 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC17.94■□□□□ 0.46
TRIM50Q86XT4 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
TRIM50Q86XT4 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC17.93■□□□□ 0.46
TRIM50Q86XT4 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC17.93■□□□□ 0.46
TRIM50Q86XT4 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
TRIM50Q86XT4 ME2P1-201ENST00000426028 1970 ntBASIC17.93■□□□□ 0.46
TRIM50Q86XT4 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
TRIM50Q86XT4 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 33.6 ms