Protein–RNA interactions for Protein: Q6NVH7

SWSAP1, ATPase SWSAP1, humanhuman

Predictions only

Length 229 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SWSAP1Q6NVH7 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SWSAP1Q6NVH7 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
SWSAP1Q6NVH7 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
SWSAP1Q6NVH7 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
SWSAP1Q6NVH7 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
SWSAP1Q6NVH7 SPDYE19P-201ENST00000338590 713 ntBASIC17.91■□□□□ 0.46
SWSAP1Q6NVH7 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
SWSAP1Q6NVH7 AZGP1P1-201ENST00000411909 902 ntBASIC17.91■□□□□ 0.46
SWSAP1Q6NVH7 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC17.91■□□□□ 0.46
SWSAP1Q6NVH7 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC17.91■□□□□ 0.46
SWSAP1Q6NVH7 PNKD-204ENST00000436005 978 ntTSL 5 BASIC17.91■□□□□ 0.46
SWSAP1Q6NVH7 DOC2GP-202ENST00000514950 1163 ntBASIC17.91■□□□□ 0.46
SWSAP1Q6NVH7 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC17.91■□□□□ 0.46
SWSAP1Q6NVH7 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SWSAP1Q6NVH7 AC025048.3-201ENST00000590609 569 ntBASIC17.91■□□□□ 0.46
SWSAP1Q6NVH7 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
SWSAP1Q6NVH7 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
SWSAP1Q6NVH7 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
SWSAP1Q6NVH7 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
SWSAP1Q6NVH7 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC17.91■□□□□ 0.46
SWSAP1Q6NVH7 AC005702.4-201ENST00000618393 416 ntBASIC17.91■□□□□ 0.46
SWSAP1Q6NVH7 RBP1-207ENST00000619087 516 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SWSAP1Q6NVH7 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SWSAP1Q6NVH7 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SWSAP1Q6NVH7 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC17.91■□□□□ 0.46
SWSAP1Q6NVH7 F11R-206ENST00000621309 4770 ntTSL 5 BASIC17.91■□□□□ 0.46
SWSAP1Q6NVH7 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC17.91■□□□□ 0.46
SWSAP1Q6NVH7 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SWSAP1Q6NVH7 ZBTB45P2-201ENST00000452245 1531 ntBASIC17.91■□□□□ 0.46
SWSAP1Q6NVH7 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
SWSAP1Q6NVH7 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
SWSAP1Q6NVH7 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SWSAP1Q6NVH7 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SWSAP1Q6NVH7 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC17.91■□□□□ 0.46
SWSAP1Q6NVH7 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SWSAP1Q6NVH7 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SWSAP1Q6NVH7 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SWSAP1Q6NVH7 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
SWSAP1Q6NVH7 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC17.9■□□□□ 0.46
SWSAP1Q6NVH7 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC17.9■□□□□ 0.46
SWSAP1Q6NVH7 WAC-202ENST00000347934 2839 ntTSL 5 BASIC17.9■□□□□ 0.46
SWSAP1Q6NVH7 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
SWSAP1Q6NVH7 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
SWSAP1Q6NVH7 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
SWSAP1Q6NVH7 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
SWSAP1Q6NVH7 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC17.9■□□□□ 0.46
SWSAP1Q6NVH7 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC17.9■□□□□ 0.46
SWSAP1Q6NVH7 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
SWSAP1Q6NVH7 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
SWSAP1Q6NVH7 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SWSAP1Q6NVH7 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC17.9■□□□□ 0.46
SWSAP1Q6NVH7 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC17.9■□□□□ 0.46
SWSAP1Q6NVH7 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
SWSAP1Q6NVH7 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC17.9■□□□□ 0.46
SWSAP1Q6NVH7 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
SWSAP1Q6NVH7 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
SWSAP1Q6NVH7 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC17.9■□□□□ 0.46
SWSAP1Q6NVH7 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC17.9■□□□□ 0.46
SWSAP1Q6NVH7 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC17.9■□□□□ 0.46
SWSAP1Q6NVH7 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
SWSAP1Q6NVH7 CDK4-206ENST00000549606 558 ntTSL 2 BASIC17.9■□□□□ 0.46
SWSAP1Q6NVH7 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
SWSAP1Q6NVH7 SRD5A3P1-201ENST00000603021 949 ntBASIC17.9■□□□□ 0.46
SWSAP1Q6NVH7 AL662799.1-202ENST00000614205 422 ntBASIC17.9■□□□□ 0.46
SWSAP1Q6NVH7 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
SWSAP1Q6NVH7 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC17.9■□□□□ 0.46
SWSAP1Q6NVH7 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC17.9■□□□□ 0.46
SWSAP1Q6NVH7 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SWSAP1Q6NVH7 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC17.9■□□□□ 0.46
SWSAP1Q6NVH7 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
SWSAP1Q6NVH7 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC17.9■□□□□ 0.46
SWSAP1Q6NVH7 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
SWSAP1Q6NVH7 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SWSAP1Q6NVH7 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SWSAP1Q6NVH7 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
SWSAP1Q6NVH7 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
SWSAP1Q6NVH7 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC17.9■□□□□ 0.46
SWSAP1Q6NVH7 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC17.89■□□□□ 0.46
SWSAP1Q6NVH7 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC17.89■□□□□ 0.46
SWSAP1Q6NVH7 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
SWSAP1Q6NVH7 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC17.89■□□□□ 0.46
SWSAP1Q6NVH7 AP001282.1-201ENST00000531301 1499 ntBASIC17.89■□□□□ 0.45
SWSAP1Q6NVH7 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC17.89■□□□□ 0.45
SWSAP1Q6NVH7 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
SWSAP1Q6NVH7 WT1-209ENST00000530998 2421 ntTSL 2 BASIC17.89■□□□□ 0.45
SWSAP1Q6NVH7 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
SWSAP1Q6NVH7 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
SWSAP1Q6NVH7 SP100-205ENST00000409824 1802 ntTSL 5 BASIC17.89■□□□□ 0.45
SWSAP1Q6NVH7 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
SWSAP1Q6NVH7 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
SWSAP1Q6NVH7 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
SWSAP1Q6NVH7 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
SWSAP1Q6NVH7 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
SWSAP1Q6NVH7 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
SWSAP1Q6NVH7 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC17.89■□□□□ 0.45
SWSAP1Q6NVH7 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
SWSAP1Q6NVH7 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
SWSAP1Q6NVH7 CALY-202ENST00000368555 783 ntTSL 2 BASIC17.89■□□□□ 0.45
SWSAP1Q6NVH7 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC17.89■□□□□ 0.45
SWSAP1Q6NVH7 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 38.3 ms