Protein–RNA interactions for Protein: Q567U6

CCDC93, Coiled-coil domain-containing protein 93, humanhuman

Predictions only

Length 631 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC93Q567U6 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC19.7■□□□□ 0.74
CCDC93Q567U6 LINC02351-201ENST00000614728 289 ntTSL 2 BASIC19.7■□□□□ 0.74
CCDC93Q567U6 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC19.7■□□□□ 0.74
CCDC93Q567U6 ACP2-205ENST00000527256 1499 ntTSL 2 BASIC19.7■□□□□ 0.74
CCDC93Q567U6 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
CCDC93Q567U6 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC19.7■□□□□ 0.74
CCDC93Q567U6 ARFIP1-202ENST00000356064 1302 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CCDC93Q567U6 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CCDC93Q567U6 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CCDC93Q567U6 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC19.7■□□□□ 0.74
CCDC93Q567U6 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
CCDC93Q567U6 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC19.7■□□□□ 0.74
CCDC93Q567U6 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
CCDC93Q567U6 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CCDC93Q567U6 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC19.7■□□□□ 0.74
CCDC93Q567U6 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CCDC93Q567U6 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC19.69■□□□□ 0.74
CCDC93Q567U6 LOX-206ENST00000639739 1626 ntTSL 5 BASIC19.69■□□□□ 0.74
CCDC93Q567U6 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CCDC93Q567U6 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
CCDC93Q567U6 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CCDC93Q567U6 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC19.69■□□□□ 0.74
CCDC93Q567U6 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CCDC93Q567U6 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
CCDC93Q567U6 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC19.69■□□□□ 0.74
CCDC93Q567U6 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC19.69■□□□□ 0.74
CCDC93Q567U6 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
CCDC93Q567U6 CATSPERZ-201ENST00000328404 743 ntAPPRIS P5 TSL 1 (best) BASIC19.69■□□□□ 0.74
CCDC93Q567U6 MBP-203ENST00000359645 1255 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
CCDC93Q567U6 PKIG-203ENST00000372887 769 ntTSL 3 BASIC19.69■□□□□ 0.74
CCDC93Q567U6 AL355864.2-201ENST00000447420 863 ntBASIC19.69■□□□□ 0.74
CCDC93Q567U6 HOXC-AS3-201ENST00000509870 544 ntTSL 4 BASIC19.69■□□□□ 0.74
CCDC93Q567U6 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC19.69■□□□□ 0.74
CCDC93Q567U6 PLEKHB1-206ENST00000535129 1049 ntAPPRIS ALT1 TSL 2 BASIC19.69■□□□□ 0.74
CCDC93Q567U6 LINC02279-201ENST00000553435 737 ntTSL 5 BASIC19.69■□□□□ 0.74
CCDC93Q567U6 ACYP1-206ENST00000555694 565 ntAPPRIS P1 TSL 3 BASIC19.69■□□□□ 0.74
CCDC93Q567U6 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC19.69■□□□□ 0.74
CCDC93Q567U6 C9orf50-202ENST00000619117 796 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
CCDC93Q567U6 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
CCDC93Q567U6 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC19.69■□□□□ 0.74
CCDC93Q567U6 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
CCDC93Q567U6 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CCDC93Q567U6 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC19.69■□□□□ 0.74
CCDC93Q567U6 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
CCDC93Q567U6 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
CCDC93Q567U6 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CCDC93Q567U6 MIER1-209ENST00000401042 1648 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
CCDC93Q567U6 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CCDC93Q567U6 TP73-213ENST00000604479 1623 ntTSL 5 BASIC19.69■□□□□ 0.74
CCDC93Q567U6 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC19.68■□□□□ 0.74
CCDC93Q567U6 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CCDC93Q567U6 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
CCDC93Q567U6 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC19.68■□□□□ 0.74
CCDC93Q567U6 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CCDC93Q567U6 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CCDC93Q567U6 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
CCDC93Q567U6 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
CCDC93Q567U6 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC19.68■□□□□ 0.74
CCDC93Q567U6 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC19.68■□□□□ 0.74
CCDC93Q567U6 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC19.68■□□□□ 0.74
CCDC93Q567U6 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC19.68■□□□□ 0.74
CCDC93Q567U6 AL157834.2-201ENST00000451737 663 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CCDC93Q567U6 RCAN1-212ENST00000492600 935 ntTSL 2 BASIC19.68■□□□□ 0.74
CCDC93Q567U6 MTX3-202ENST00000512528 1280 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CCDC93Q567U6 EMC4-209ENST00000559421 497 ntTSL 2 BASIC19.68■□□□□ 0.74
CCDC93Q567U6 AC009093.8-202ENST00000562902 677 ntTSL 2 BASIC19.68■□□□□ 0.74
CCDC93Q567U6 DERL2-202ENST00000570848 657 ntTSL 5 BASIC19.68■□□□□ 0.74
CCDC93Q567U6 AC024619.2-201ENST00000581964 517 ntTSL 5 BASIC19.68■□□□□ 0.74
CCDC93Q567U6 ZNF180-204ENST00000586637 1023 ntTSL 5 BASIC19.68■□□□□ 0.74
CCDC93Q567U6 FP565260.6-205ENST00000624120 898 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CCDC93Q567U6 AL139099.5-201ENST00000635274 300 ntBASIC19.68■□□□□ 0.74
CCDC93Q567U6 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CCDC93Q567U6 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC19.68■□□□□ 0.74
CCDC93Q567U6 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CCDC93Q567U6 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC19.68■□□□□ 0.74
CCDC93Q567U6 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CCDC93Q567U6 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
CCDC93Q567U6 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CCDC93Q567U6 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC19.68■□□□□ 0.74
CCDC93Q567U6 FDFT1-202ENST00000443614 1393 ntTSL 2 BASIC19.68■□□□□ 0.74
CCDC93Q567U6 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
CCDC93Q567U6 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
CCDC93Q567U6 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CCDC93Q567U6 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CCDC93Q567U6 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC19.67■□□□□ 0.74
CCDC93Q567U6 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CCDC93Q567U6 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CCDC93Q567U6 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
CCDC93Q567U6 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CCDC93Q567U6 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CCDC93Q567U6 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CCDC93Q567U6 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC19.67■□□□□ 0.74
CCDC93Q567U6 AC007952.1-202ENST00000399083 1173 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CCDC93Q567U6 GOLGA2P4-201ENST00000441462 777 ntBASIC19.67■□□□□ 0.74
CCDC93Q567U6 YBX1P6-201ENST00000442962 1002 ntBASIC19.67■□□□□ 0.74
CCDC93Q567U6 AC007551.1-201ENST00000457394 519 ntBASIC19.67■□□□□ 0.74
CCDC93Q567U6 AC018685.1-201ENST00000457813 368 ntTSL 3 BASIC19.67■□□□□ 0.74
CCDC93Q567U6 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC19.67■□□□□ 0.74
CCDC93Q567U6 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC19.67■□□□□ 0.74
CCDC93Q567U6 AC243960.2-201ENST00000600996 747 ntBASIC19.67■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 47.7 ms