Protein–RNA interactions for Protein: Q494W8

CHRFAM7A, CHRNA7-FAM7A fusion protein, humanhuman

Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7AQ494W8 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CHRFAM7AQ494W8 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
CHRFAM7AQ494W8 SHH-201ENST00000297261 4454 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CHRFAM7AQ494W8 ABCA7-201ENST00000263094 6816 ntAPPRIS P2 TSL 5 BASIC14.24□□□□□ -0.13
CHRFAM7AQ494W8 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CHRFAM7AQ494W8 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC14.24□□□□□ -0.13
CHRFAM7AQ494W8 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
CHRFAM7AQ494W8 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CHRFAM7AQ494W8 MTA3-203ENST00000406652 5484 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
CHRFAM7AQ494W8 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC14.24□□□□□ -0.13
CHRFAM7AQ494W8 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CHRFAM7AQ494W8 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
CHRFAM7AQ494W8 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
CHRFAM7AQ494W8 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
CHRFAM7AQ494W8 AC004461.1-201ENST00000412461 403 ntBASIC14.24□□□□□ -0.13
CHRFAM7AQ494W8 AC023141.5-201ENST00000458585 616 ntBASIC14.24□□□□□ -0.13
CHRFAM7AQ494W8 AC067863.1-201ENST00000494933 530 ntBASIC14.24□□□□□ -0.13
CHRFAM7AQ494W8 RBM7-207ENST00000544582 692 ntTSL 3 BASIC14.24□□□□□ -0.13
CHRFAM7AQ494W8 RPL28-205ENST00000558131 444 ntTSL 5 BASIC14.24□□□□□ -0.13
CHRFAM7AQ494W8 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC14.24□□□□□ -0.13
CHRFAM7AQ494W8 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC14.24□□□□□ -0.13
CHRFAM7AQ494W8 AC005498.2-205ENST00000593218 784 ntBASIC14.24□□□□□ -0.13
CHRFAM7AQ494W8 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
CHRFAM7AQ494W8 AJ011932.1-201ENST00000621707 465 ntBASIC14.24□□□□□ -0.13
CHRFAM7AQ494W8 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC14.24□□□□□ -0.13
CHRFAM7AQ494W8 LINC00628-201ENST00000628516 1289 ntBASIC14.24□□□□□ -0.13
CHRFAM7AQ494W8 ALDH1A2-201ENST00000249750 4098 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CHRFAM7AQ494W8 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC14.24□□□□□ -0.13
CHRFAM7AQ494W8 SLCO4C1-201ENST00000310954 5334 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CHRFAM7AQ494W8 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
CHRFAM7AQ494W8 SRD5A2-201ENST00000622030 4648 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CHRFAM7AQ494W8 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
CHRFAM7AQ494W8 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CHRFAM7AQ494W8 LINC00554-201ENST00000564841 3011 ntBASIC14.24□□□□□ -0.13
CHRFAM7AQ494W8 AC097376.2-205ENST00000610159 5334 ntBASIC14.24□□□□□ -0.13
CHRFAM7AQ494W8 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC14.24□□□□□ -0.13
CHRFAM7AQ494W8 EXT1-201ENST00000378204 8270 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CHRFAM7AQ494W8 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CHRFAM7AQ494W8 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC14.24□□□□□ -0.13
CHRFAM7AQ494W8 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
CHRFAM7AQ494W8 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
CHRFAM7AQ494W8 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC14.24□□□□□ -0.13
CHRFAM7AQ494W8 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
CHRFAM7AQ494W8 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC14.24□□□□□ -0.13
CHRFAM7AQ494W8 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CHRFAM7AQ494W8 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC14.23□□□□□ -0.13
CHRFAM7AQ494W8 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC14.23□□□□□ -0.13
CHRFAM7AQ494W8 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CHRFAM7AQ494W8 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
CHRFAM7AQ494W8 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
CHRFAM7AQ494W8 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CHRFAM7AQ494W8 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
CHRFAM7AQ494W8 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CHRFAM7AQ494W8 WIZ-207ENST00000599910 4609 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
CHRFAM7AQ494W8 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC14.23□□□□□ -0.13
CHRFAM7AQ494W8 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
CHRFAM7AQ494W8 LINC00895-201ENST00000629028 1637 ntBASIC14.23□□□□□ -0.13
CHRFAM7AQ494W8 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC14.23□□□□□ -0.13
CHRFAM7AQ494W8 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC14.23□□□□□ -0.13
CHRFAM7AQ494W8 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CHRFAM7AQ494W8 INPP5D-201ENST00000359570 5274 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
CHRFAM7AQ494W8 CUL7-203ENST00000535468 5504 ntAPPRIS ALT2 TSL 2 BASIC14.23□□□□□ -0.13
CHRFAM7AQ494W8 FGD5-206ENST00000543601 5768 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
CHRFAM7AQ494W8 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CHRFAM7AQ494W8 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CHRFAM7AQ494W8 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
CHRFAM7AQ494W8 TAOK3-201ENST00000392533 4384 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CHRFAM7AQ494W8 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC14.23□□□□□ -0.13
CHRFAM7AQ494W8 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CHRFAM7AQ494W8 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CHRFAM7AQ494W8 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
CHRFAM7AQ494W8 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
CHRFAM7AQ494W8 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC14.23□□□□□ -0.13
CHRFAM7AQ494W8 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
CHRFAM7AQ494W8 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
CHRFAM7AQ494W8 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC14.23□□□□□ -0.13
CHRFAM7AQ494W8 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC14.23□□□□□ -0.13
CHRFAM7AQ494W8 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC14.23□□□□□ -0.13
CHRFAM7AQ494W8 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC14.23□□□□□ -0.13
CHRFAM7AQ494W8 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC14.23□□□□□ -0.13
CHRFAM7AQ494W8 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC14.23□□□□□ -0.13
CHRFAM7AQ494W8 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC14.23□□□□□ -0.13
CHRFAM7AQ494W8 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC14.23□□□□□ -0.13
CHRFAM7AQ494W8 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC14.23□□□□□ -0.13
CHRFAM7AQ494W8 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
CHRFAM7AQ494W8 AC105339.1-204ENST00000636249 355 ntBASIC14.23□□□□□ -0.13
CHRFAM7AQ494W8 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC14.23□□□□□ -0.13
CHRFAM7AQ494W8 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC14.23□□□□□ -0.13
CHRFAM7AQ494W8 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CHRFAM7AQ494W8 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CHRFAM7AQ494W8 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CHRFAM7AQ494W8 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CHRFAM7AQ494W8 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
CHRFAM7AQ494W8 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
CHRFAM7AQ494W8 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
CHRFAM7AQ494W8 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
CHRFAM7AQ494W8 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
CHRFAM7AQ494W8 TMEM200C-202ENST00000581347 10638 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
CHRFAM7AQ494W8 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC14.23□□□□□ -0.13
CHRFAM7AQ494W8 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 62.7 ms