Protein–RNA interactions for Protein: Q2M243

CCDC27, Coiled-coil domain-containing protein 27, humanhuman

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC27Q2M243 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC20.91■□□□□ 0.94
CCDC27Q2M243 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CCDC27Q2M243 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CCDC27Q2M243 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
CCDC27Q2M243 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC20.91■□□□□ 0.94
CCDC27Q2M243 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC20.91■□□□□ 0.94
CCDC27Q2M243 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC20.91■□□□□ 0.94
CCDC27Q2M243 HLA-DQB2-231ENST00000435145 2026 ntBASIC20.91■□□□□ 0.94
CCDC27Q2M243 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
CCDC27Q2M243 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC20.91■□□□□ 0.94
CCDC27Q2M243 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
CCDC27Q2M243 ZNF890P-202ENST00000530367 1156 ntBASIC20.91■□□□□ 0.94
CCDC27Q2M243 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC20.91■□□□□ 0.94
CCDC27Q2M243 DUX4L27-201ENST00000554796 1261 ntBASIC20.91■□□□□ 0.94
CCDC27Q2M243 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
CCDC27Q2M243 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC20.91■□□□□ 0.94
CCDC27Q2M243 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC20.91■□□□□ 0.94
CCDC27Q2M243 SPIB-207ENST00000597855 564 ntTSL 4 BASIC20.91■□□□□ 0.94
CCDC27Q2M243 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
CCDC27Q2M243 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC20.91■□□□□ 0.94
CCDC27Q2M243 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CCDC27Q2M243 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CCDC27Q2M243 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
CCDC27Q2M243 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
CCDC27Q2M243 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC20.9■□□□□ 0.94
CCDC27Q2M243 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CCDC27Q2M243 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CCDC27Q2M243 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC20.9■□□□□ 0.94
CCDC27Q2M243 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
CCDC27Q2M243 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC20.9■□□□□ 0.94
CCDC27Q2M243 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
CCDC27Q2M243 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
CCDC27Q2M243 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC20.9■□□□□ 0.94
CCDC27Q2M243 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC20.9■□□□□ 0.94
CCDC27Q2M243 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CCDC27Q2M243 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC20.9■□□□□ 0.94
CCDC27Q2M243 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
CCDC27Q2M243 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CCDC27Q2M243 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC20.9■□□□□ 0.94
CCDC27Q2M243 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
CCDC27Q2M243 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CCDC27Q2M243 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CCDC27Q2M243 PNMT-202ENST00000394246 821 ntTSL 2 BASIC20.9■□□□□ 0.94
CCDC27Q2M243 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
CCDC27Q2M243 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC20.9■□□□□ 0.94
CCDC27Q2M243 AL033527.5-202ENST00000641632 1098 ntBASIC20.9■□□□□ 0.94
CCDC27Q2M243 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CCDC27Q2M243 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CCDC27Q2M243 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC20.9■□□□□ 0.94
CCDC27Q2M243 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CCDC27Q2M243 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC20.9■□□□□ 0.94
CCDC27Q2M243 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
CCDC27Q2M243 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
CCDC27Q2M243 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC20.9■□□□□ 0.94
CCDC27Q2M243 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
CCDC27Q2M243 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC20.9■□□□□ 0.94
CCDC27Q2M243 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
CCDC27Q2M243 LOX-206ENST00000639739 1626 ntTSL 5 BASIC20.89■□□□□ 0.94
CCDC27Q2M243 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.94
CCDC27Q2M243 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC20.89■□□□□ 0.94
CCDC27Q2M243 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.93
CCDC27Q2M243 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
CCDC27Q2M243 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CCDC27Q2M243 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
CCDC27Q2M243 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC20.89■□□□□ 0.93
CCDC27Q2M243 HLA-DRB6-201ENST00000411500 1235 ntBASIC20.89■□□□□ 0.93
CCDC27Q2M243 TSSK5P-201ENST00000423978 907 ntBASIC20.89■□□□□ 0.93
CCDC27Q2M243 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC20.89■□□□□ 0.93
CCDC27Q2M243 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC20.89■□□□□ 0.93
CCDC27Q2M243 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC20.89■□□□□ 0.93
CCDC27Q2M243 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC20.89■□□□□ 0.93
CCDC27Q2M243 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC20.89■□□□□ 0.93
CCDC27Q2M243 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
CCDC27Q2M243 AL512361.1-201ENST00000554200 418 ntBASIC20.89■□□□□ 0.93
CCDC27Q2M243 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
CCDC27Q2M243 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC20.89■□□□□ 0.93
CCDC27Q2M243 AL390955.2-201ENST00000603032 514 ntBASIC20.89■□□□□ 0.93
CCDC27Q2M243 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CCDC27Q2M243 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CCDC27Q2M243 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.93
CCDC27Q2M243 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC20.89■□□□□ 0.93
CCDC27Q2M243 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC20.89■□□□□ 0.93
CCDC27Q2M243 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
CCDC27Q2M243 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CCDC27Q2M243 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
CCDC27Q2M243 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC20.88■□□□□ 0.93
CCDC27Q2M243 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
CCDC27Q2M243 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
CCDC27Q2M243 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CCDC27Q2M243 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
CCDC27Q2M243 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CCDC27Q2M243 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CCDC27Q2M243 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
CCDC27Q2M243 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
CCDC27Q2M243 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CCDC27Q2M243 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CCDC27Q2M243 AC087499.5-201ENST00000452760 1342 ntBASIC20.88■□□□□ 0.93
CCDC27Q2M243 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
CCDC27Q2M243 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
CCDC27Q2M243 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 37.2 ms