Protein–RNA interactions for Protein: Q02505

MUC3A, Mucin-3A, humanhuman

Predictions only

Length 3,323 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MUC3AQ02505 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
MUC3AQ02505 CRYBA4-201ENST00000354760 811 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
MUC3AQ02505 PGGT1BP2-201ENST00000398621 1028 ntBASIC16.06■□□□□ 0.16
MUC3AQ02505 LINC00441-201ENST00000433480 1143 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
MUC3AQ02505 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
MUC3AQ02505 RPL19-207ENST00000582193 792 ntAPPRIS ALT1 TSL 5 BASIC16.06■□□□□ 0.16
MUC3AQ02505 ZCCHC4-206ENST00000612982 938 ntTSL 5 BASIC16.06■□□□□ 0.16
MUC3AQ02505 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
MUC3AQ02505 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
MUC3AQ02505 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
MUC3AQ02505 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
MUC3AQ02505 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC16.06■□□□□ 0.16
MUC3AQ02505 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC16.06■□□□□ 0.16
MUC3AQ02505 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC16.06■□□□□ 0.16
MUC3AQ02505 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
MUC3AQ02505 MAX-201ENST00000246163 897 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
MUC3AQ02505 AL365295.1-203ENST00000435322 566 ntTSL 4 BASIC16.06■□□□□ 0.16
MUC3AQ02505 RNF216P1-212ENST00000493407 659 ntTSL 3 BASIC16.06■□□□□ 0.16
MUC3AQ02505 KRT8P35-201ENST00000483942 1338 ntBASIC16.05■□□□□ 0.16
MUC3AQ02505 SMPDL3A-201ENST00000368440 1851 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
MUC3AQ02505 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
MUC3AQ02505 MAGEA1-201ENST00000356661 1710 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
MUC3AQ02505 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC16.05■□□□□ 0.16
MUC3AQ02505 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
MUC3AQ02505 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
MUC3AQ02505 DKK4-201ENST00000220812 894 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
MUC3AQ02505 GSG1L-201ENST00000380897 1173 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
MUC3AQ02505 EMP1-203ENST00000431267 1039 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
MUC3AQ02505 FXR1-221ENST00000491674 365 ntTSL 2 BASIC16.05■□□□□ 0.16
MUC3AQ02505 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
MUC3AQ02505 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
MUC3AQ02505 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
MUC3AQ02505 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
MUC3AQ02505 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
MUC3AQ02505 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
MUC3AQ02505 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
MUC3AQ02505 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC16.05■□□□□ 0.16
MUC3AQ02505 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
MUC3AQ02505 DBNDD2-201ENST00000357275 1036 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
MUC3AQ02505 AC116345.2-201ENST00000512837 523 ntBASIC16.05■□□□□ 0.16
MUC3AQ02505 MIR5196-201ENST00000578146 115 ntBASIC16.05■□□□□ 0.16
MUC3AQ02505 AL805961.1-203ENST00000641078 1258 ntBASIC16.05■□□□□ 0.16
MUC3AQ02505 BRMS1-202ENST00000425825 1363 ntTSL 5 BASIC16.05■□□□□ 0.16
MUC3AQ02505 LINC02405-201ENST00000512624 1361 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
MUC3AQ02505 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
MUC3AQ02505 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
MUC3AQ02505 GPBAR1-203ENST00000521462 1465 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
MUC3AQ02505 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
MUC3AQ02505 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC16.05■□□□□ 0.16
MUC3AQ02505 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC16.05■□□□□ 0.16
MUC3AQ02505 RPL39L-201ENST00000296277 756 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
MUC3AQ02505 CRCP-204ENST00000398684 492 ntTSL 2 BASIC16.04■□□□□ 0.16
MUC3AQ02505 DERL3-208ENST00000476077 969 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
MUC3AQ02505 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC16.04■□□□□ 0.16
MUC3AQ02505 KRT16P3-202ENST00000580113 1012 ntTSL 3 BASIC16.04■□□□□ 0.16
MUC3AQ02505 KRT16P1-203ENST00000581027 1012 ntTSL 5 BASIC16.04■□□□□ 0.16
MUC3AQ02505 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
MUC3AQ02505 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
MUC3AQ02505 AC074138.1-201ENST00000611182 1303 ntBASIC16.04■□□□□ 0.16
MUC3AQ02505 SULT2B1-202ENST00000323090 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
MUC3AQ02505 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
MUC3AQ02505 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC16.04■□□□□ 0.16
MUC3AQ02505 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
MUC3AQ02505 SST-201ENST00000287641 618 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
MUC3AQ02505 MRPL19-201ENST00000358788 693 ntTSL 5 BASIC16.04■□□□□ 0.16
MUC3AQ02505 AC092535.3-201ENST00000504969 468 ntTSL 3 BASIC16.04■□□□□ 0.16
MUC3AQ02505 AC109479.3-201ENST00000520163 360 ntTSL 3 BASIC16.04■□□□□ 0.16
MUC3AQ02505 SIRT3-210ENST00000529382 1225 ntTSL 2 BASIC16.04■□□□□ 0.16
MUC3AQ02505 DCTPP1-202ENST00000565758 749 ntTSL 3 BASIC16.04■□□□□ 0.16
MUC3AQ02505 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
MUC3AQ02505 TOMM7-207ENST00000621567 241 ntAPPRIS ALT1 TSL 5 BASIC16.04■□□□□ 0.16
MUC3AQ02505 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC16.04■□□□□ 0.16
MUC3AQ02505 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC16.04■□□□□ 0.16
MUC3AQ02505 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC16.04■□□□□ 0.16
MUC3AQ02505 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
MUC3AQ02505 KAAG1-201ENST00000274766 1382 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
MUC3AQ02505 TPRKB-202ENST00000318190 819 ntTSL 5 BASIC16.04■□□□□ 0.16
MUC3AQ02505 RAC2-202ENST00000401529 569 ntTSL 4 BASIC16.04■□□□□ 0.16
MUC3AQ02505 CNRIP1-202ENST00000409559 644 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
MUC3AQ02505 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
MUC3AQ02505 ALG1L2-201ENST00000425059 969 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
MUC3AQ02505 CCDC51-204ENST00000442740 1554 ntTSL 3 BASIC16.04■□□□□ 0.16
MUC3AQ02505 KLK11-204ENST00000453757 1174 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
MUC3AQ02505 OARD1-204ENST00000464633 717 ntTSL 2 BASIC16.04■□□□□ 0.16
MUC3AQ02505 AC133963.1-201ENST00000504166 1679 ntBASIC16.04■□□□□ 0.16
MUC3AQ02505 AC091564.6-201ENST00000526633 487 ntTSL 3 BASIC16.04■□□□□ 0.16
MUC3AQ02505 CYB561D1-207ENST00000527072 892 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
MUC3AQ02505 AP001547.1-201ENST00000527440 374 ntTSL 3 BASIC16.04■□□□□ 0.16
MUC3AQ02505 AP002803.1-201ENST00000528836 498 ntBASIC16.04■□□□□ 0.16
MUC3AQ02505 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC16.04■□□□□ 0.16
MUC3AQ02505 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
MUC3AQ02505 EDDM13-208ENST00000637802 854 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
MUC3AQ02505 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
MUC3AQ02505 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
MUC3AQ02505 SLC16A6P1-201ENST00000413214 1059 ntBASIC16.03■□□□□ 0.16
MUC3AQ02505 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
MUC3AQ02505 TMCO5B-205ENST00000530020 894 ntBASIC16.03■□□□□ 0.16
MUC3AQ02505 AP000842.2-201ENST00000533033 517 ntTSL 4 BASIC16.03■□□□□ 0.16
MUC3AQ02505 NME1-NME2-203ENST00000555572 1193 ntAPPRIS ALT2 TSL 2 BASIC16.03■□□□□ 0.16
MUC3AQ02505 SMIM22-209ENST00000591870 355 ntAPPRIS ALT2 TSL 2 BASIC16.03■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 43.5 ms