Protein–RNA interactions for Protein: Q01850

CDR2, Cerebellar degeneration-related protein 2, humanhuman

Predictions only

Length 454 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDR2Q01850 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC17.24■□□□□ 0.35
CDR2Q01850 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CDR2Q01850 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
CDR2Q01850 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
CDR2Q01850 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
CDR2Q01850 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CDR2Q01850 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
CDR2Q01850 AC011477.6-201ENST00000604980 1927 ntBASIC17.24■□□□□ 0.35
CDR2Q01850 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CDR2Q01850 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC17.24■□□□□ 0.35
CDR2Q01850 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
CDR2Q01850 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
CDR2Q01850 FABP5-202ENST00000396359 986 ntTSL 5 BASIC17.24■□□□□ 0.35
CDR2Q01850 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CDR2Q01850 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC17.24■□□□□ 0.35
CDR2Q01850 ACTG1P14-201ENST00000446382 1122 ntBASIC17.24■□□□□ 0.35
CDR2Q01850 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC17.24■□□□□ 0.35
CDR2Q01850 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC17.24■□□□□ 0.35
CDR2Q01850 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC17.24■□□□□ 0.35
CDR2Q01850 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC17.24■□□□□ 0.35
CDR2Q01850 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC17.24■□□□□ 0.35
CDR2Q01850 AC026120.1-201ENST00000611536 926 ntBASIC17.24■□□□□ 0.35
CDR2Q01850 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CDR2Q01850 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
CDR2Q01850 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC17.24■□□□□ 0.35
CDR2Q01850 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CDR2Q01850 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
CDR2Q01850 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC17.24■□□□□ 0.35
CDR2Q01850 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC17.24■□□□□ 0.35
CDR2Q01850 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC17.24■□□□□ 0.35
CDR2Q01850 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC17.24■□□□□ 0.35
CDR2Q01850 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CDR2Q01850 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CDR2Q01850 AP001282.1-201ENST00000531301 1499 ntBASIC17.24■□□□□ 0.35
CDR2Q01850 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CDR2Q01850 CCDC187-205ENST00000638797 10126 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
CDR2Q01850 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC17.24■□□□□ 0.35
CDR2Q01850 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CDR2Q01850 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC17.23■□□□□ 0.35
CDR2Q01850 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CDR2Q01850 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CDR2Q01850 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
CDR2Q01850 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CDR2Q01850 AC068418.2-201ENST00000577309 3703 ntBASIC17.23■□□□□ 0.35
CDR2Q01850 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
CDR2Q01850 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
CDR2Q01850 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CDR2Q01850 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CDR2Q01850 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CDR2Q01850 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CDR2Q01850 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC17.23■□□□□ 0.35
CDR2Q01850 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CDR2Q01850 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
CDR2Q01850 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CDR2Q01850 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC17.23■□□□□ 0.35
CDR2Q01850 SPCS2P4-201ENST00000436160 681 ntBASIC17.23■□□□□ 0.35
CDR2Q01850 MKNK2P1-201ENST00000437526 628 ntBASIC17.23■□□□□ 0.35
CDR2Q01850 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC17.23■□□□□ 0.35
CDR2Q01850 SPDYE11-202ENST00000450699 704 ntBASIC17.23■□□□□ 0.35
CDR2Q01850 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC17.23■□□□□ 0.35
CDR2Q01850 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
CDR2Q01850 KRT8P48-201ENST00000515599 1220 ntBASIC17.23■□□□□ 0.35
CDR2Q01850 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC17.23■□□□□ 0.35
CDR2Q01850 LINC01225-203ENST00000563550 1244 ntBASIC17.23■□□□□ 0.35
CDR2Q01850 SPDYE9P-201ENST00000570642 692 ntBASIC17.23■□□□□ 0.35
CDR2Q01850 AC024267.1-201ENST00000582320 895 ntBASIC17.23■□□□□ 0.35
CDR2Q01850 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC17.23■□□□□ 0.35
CDR2Q01850 MTDHP5-201ENST00000598980 586 ntBASIC17.23■□□□□ 0.35
CDR2Q01850 SPDYE10P-202ENST00000612005 668 ntBASIC17.23■□□□□ 0.35
CDR2Q01850 SPDYE8P-202ENST00000612377 668 ntBASIC17.23■□□□□ 0.35
CDR2Q01850 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC17.23■□□□□ 0.35
CDR2Q01850 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC17.23■□□□□ 0.35
CDR2Q01850 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CDR2Q01850 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CDR2Q01850 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CDR2Q01850 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC17.23■□□□□ 0.35
CDR2Q01850 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
CDR2Q01850 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
CDR2Q01850 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC17.23■□□□□ 0.35
CDR2Q01850 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CDR2Q01850 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC17.23■□□□□ 0.35
CDR2Q01850 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CDR2Q01850 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC17.23■□□□□ 0.35
CDR2Q01850 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CDR2Q01850 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
CDR2Q01850 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CDR2Q01850 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
CDR2Q01850 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CDR2Q01850 PRAL-201ENST00000624952 3286 ntBASIC17.22■□□□□ 0.35
CDR2Q01850 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CDR2Q01850 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
CDR2Q01850 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CDR2Q01850 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC17.22■□□□□ 0.35
CDR2Q01850 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
CDR2Q01850 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
CDR2Q01850 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC17.22■□□□□ 0.35
CDR2Q01850 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CDR2Q01850 TSPY26P-202ENST00000565928 3884 ntBASIC17.22■□□□□ 0.35
CDR2Q01850 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC17.22■□□□□ 0.35
CDR2Q01850 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 48.7 ms