Protein–RNA interactions for Protein: Q00526

CDK3, Cyclin-dependent kinase 3, humanhuman

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK3Q00526 TEX48-202ENST00000612244 662 ntTSL 3 BASIC15.83■□□□□ 0.12
CDK3Q00526 RNA5-8SN5-202ENST00000612463 153 ntBASIC15.83■□□□□ 0.12
CDK3Q00526 RNA5-8SN4-201ENST00000613359 153 ntBASIC15.83■□□□□ 0.12
CDK3Q00526 RNA5-8SN5-201ENST00000619471 153 ntBASIC15.83■□□□□ 0.12
CDK3Q00526 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC15.83■□□□□ 0.12
CDK3Q00526 AL109936.8-201ENST00000641772 604 ntBASIC15.83■□□□□ 0.12
CDK3Q00526 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.12
CDK3Q00526 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CDK3Q00526 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
CDK3Q00526 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.12
CDK3Q00526 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC15.83■□□□□ 0.12
CDK3Q00526 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC15.83■□□□□ 0.12
CDK3Q00526 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC15.83■□□□□ 0.12
CDK3Q00526 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CDK3Q00526 NFIC-211ENST00000641145 8399 ntBASIC15.83■□□□□ 0.12
CDK3Q00526 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC15.83■□□□□ 0.12
CDK3Q00526 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
CDK3Q00526 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CDK3Q00526 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC15.83■□□□□ 0.12
CDK3Q00526 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.12
CDK3Q00526 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CDK3Q00526 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
CDK3Q00526 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
CDK3Q00526 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CDK3Q00526 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC15.82■□□□□ 0.12
CDK3Q00526 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CDK3Q00526 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC15.82■□□□□ 0.12
CDK3Q00526 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC15.82■□□□□ 0.12
CDK3Q00526 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
CDK3Q00526 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CDK3Q00526 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
CDK3Q00526 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC15.82■□□□□ 0.12
CDK3Q00526 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC15.82■□□□□ 0.12
CDK3Q00526 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC15.82■□□□□ 0.12
CDK3Q00526 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CDK3Q00526 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CDK3Q00526 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CDK3Q00526 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
CDK3Q00526 AZGP1P1-201ENST00000411909 902 ntBASIC15.82■□□□□ 0.12
CDK3Q00526 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
CDK3Q00526 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC15.82■□□□□ 0.12
CDK3Q00526 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CDK3Q00526 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
CDK3Q00526 AC104794.3-201ENST00000566840 1248 ntBASIC15.82■□□□□ 0.12
CDK3Q00526 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC15.82■□□□□ 0.12
CDK3Q00526 AC025048.3-201ENST00000590609 569 ntBASIC15.82■□□□□ 0.12
CDK3Q00526 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC15.82■□□□□ 0.12
CDK3Q00526 AC005702.4-201ENST00000618393 416 ntBASIC15.82■□□□□ 0.12
CDK3Q00526 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CDK3Q00526 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CDK3Q00526 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CDK3Q00526 PGR-209ENST00000617858 2816 ntTSL 5 BASIC15.82■□□□□ 0.12
CDK3Q00526 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CDK3Q00526 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC15.82■□□□□ 0.12
CDK3Q00526 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CDK3Q00526 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC15.82■□□□□ 0.12
CDK3Q00526 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CDK3Q00526 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC15.82■□□□□ 0.12
CDK3Q00526 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
CDK3Q00526 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CDK3Q00526 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CDK3Q00526 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC15.82■□□□□ 0.12
CDK3Q00526 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC15.82■□□□□ 0.12
CDK3Q00526 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC15.82■□□□□ 0.12
CDK3Q00526 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
CDK3Q00526 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CDK3Q00526 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
CDK3Q00526 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CDK3Q00526 WT1-209ENST00000530998 2421 ntTSL 2 BASIC15.82■□□□□ 0.12
CDK3Q00526 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CDK3Q00526 PCDH8P1-201ENST00000428983 2773 ntBASIC15.81■□□□□ 0.12
CDK3Q00526 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC15.81■□□□□ 0.12
CDK3Q00526 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
CDK3Q00526 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
CDK3Q00526 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CDK3Q00526 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CDK3Q00526 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC15.81■□□□□ 0.12
CDK3Q00526 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC15.81■□□□□ 0.12
CDK3Q00526 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CDK3Q00526 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
CDK3Q00526 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CDK3Q00526 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CDK3Q00526 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC15.81■□□□□ 0.12
CDK3Q00526 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC15.81■□□□□ 0.12
CDK3Q00526 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC15.81■□□□□ 0.12
CDK3Q00526 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC15.81■□□□□ 0.12
CDK3Q00526 RAD18-204ENST00000418463 563 ntTSL 4 BASIC15.81■□□□□ 0.12
CDK3Q00526 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC15.81■□□□□ 0.12
CDK3Q00526 RAD18-205ENST00000421052 582 ntTSL 3 BASIC15.81■□□□□ 0.12
CDK3Q00526 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC15.81■□□□□ 0.12
CDK3Q00526 RASL12-203ENST00000434605 982 ntTSL 2 BASIC15.81■□□□□ 0.12
CDK3Q00526 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
CDK3Q00526 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC15.81■□□□□ 0.12
CDK3Q00526 SPDYE18-201ENST00000510091 1050 ntBASIC15.81■□□□□ 0.12
CDK3Q00526 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC15.81■□□□□ 0.12
CDK3Q00526 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC15.81■□□□□ 0.12
CDK3Q00526 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC15.81■□□□□ 0.12
CDK3Q00526 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC15.81■□□□□ 0.12
CDK3Q00526 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC15.81■□□□□ 0.12
CDK3Q00526 AC004233.3-201ENST00000607794 1269 ntBASIC15.81■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 84.5 ms