Protein–RNA interactions for Protein: P78348

ASIC1, Acid-sensing ion channel 1, humanhuman

Predictions only

Length 528 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ASIC1P78348 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC18.06■□□□□ 0.48
ASIC1P78348 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
ASIC1P78348 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
ASIC1P78348 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC18.06■□□□□ 0.48
ASIC1P78348 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
ASIC1P78348 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC18.06■□□□□ 0.48
ASIC1P78348 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
ASIC1P78348 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC18.05■□□□□ 0.48
ASIC1P78348 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
ASIC1P78348 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
ASIC1P78348 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
ASIC1P78348 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC18.05■□□□□ 0.48
ASIC1P78348 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC18.05■□□□□ 0.48
ASIC1P78348 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC18.05■□□□□ 0.48
ASIC1P78348 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
ASIC1P78348 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
ASIC1P78348 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
ASIC1P78348 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
ASIC1P78348 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC18.05■□□□□ 0.48
ASIC1P78348 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
ASIC1P78348 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
ASIC1P78348 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC18.05■□□□□ 0.48
ASIC1P78348 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC18.05■□□□□ 0.48
ASIC1P78348 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
ASIC1P78348 AC142381.1-201ENST00000426099 345 ntBASIC18.05■□□□□ 0.48
ASIC1P78348 SPCS2P4-201ENST00000436160 681 ntBASIC18.05■□□□□ 0.48
ASIC1P78348 MKNK2P1-201ENST00000437526 628 ntBASIC18.05■□□□□ 0.48
ASIC1P78348 ACTG1P14-201ENST00000446382 1122 ntBASIC18.05■□□□□ 0.48
ASIC1P78348 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
ASIC1P78348 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC18.05■□□□□ 0.48
ASIC1P78348 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC18.05■□□□□ 0.48
ASIC1P78348 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC18.05■□□□□ 0.48
ASIC1P78348 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC18.05■□□□□ 0.48
ASIC1P78348 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC18.05■□□□□ 0.48
ASIC1P78348 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC18.05■□□□□ 0.48
ASIC1P78348 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC18.05■□□□□ 0.48
ASIC1P78348 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
ASIC1P78348 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC18.05■□□□□ 0.48
ASIC1P78348 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC18.05■□□□□ 0.48
ASIC1P78348 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC18.05■□□□□ 0.48
ASIC1P78348 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC18.05■□□□□ 0.48
ASIC1P78348 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC18.05■□□□□ 0.48
ASIC1P78348 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC18.05■□□□□ 0.48
ASIC1P78348 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
ASIC1P78348 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
ASIC1P78348 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
ASIC1P78348 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
ASIC1P78348 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC18.05■□□□□ 0.48
ASIC1P78348 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
ASIC1P78348 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
ASIC1P78348 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
ASIC1P78348 AC105917.1-201ENST00000506637 2539 ntBASIC18.05■□□□□ 0.48
ASIC1P78348 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
ASIC1P78348 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
ASIC1P78348 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC18.05■□□□□ 0.48
ASIC1P78348 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
ASIC1P78348 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC18.05■□□□□ 0.48
ASIC1P78348 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC18.04■□□□□ 0.48
ASIC1P78348 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
ASIC1P78348 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC18.04■□□□□ 0.48
ASIC1P78348 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC18.04■□□□□ 0.48
ASIC1P78348 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC18.04■□□□□ 0.48
ASIC1P78348 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
ASIC1P78348 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
ASIC1P78348 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC18.04■□□□□ 0.48
ASIC1P78348 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC18.04■□□□□ 0.48
ASIC1P78348 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
ASIC1P78348 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
ASIC1P78348 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
ASIC1P78348 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
ASIC1P78348 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
ASIC1P78348 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC18.04■□□□□ 0.48
ASIC1P78348 IGHV3-62-201ENST00000520057 340 ntBASIC18.04■□□□□ 0.48
ASIC1P78348 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC18.04■□□□□ 0.48
ASIC1P78348 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC18.04■□□□□ 0.48
ASIC1P78348 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC18.04■□□□□ 0.48
ASIC1P78348 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC18.04■□□□□ 0.48
ASIC1P78348 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
ASIC1P78348 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC18.04■□□□□ 0.48
ASIC1P78348 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
ASIC1P78348 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
ASIC1P78348 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC18.04■□□□□ 0.48
ASIC1P78348 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
ASIC1P78348 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC18.04■□□□□ 0.48
ASIC1P78348 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC18.04■□□□□ 0.48
ASIC1P78348 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC18.04■□□□□ 0.48
ASIC1P78348 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
ASIC1P78348 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
ASIC1P78348 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
ASIC1P78348 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC18.04■□□□□ 0.48
ASIC1P78348 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
ASIC1P78348 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
ASIC1P78348 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
ASIC1P78348 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
ASIC1P78348 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC18.04■□□□□ 0.48
ASIC1P78348 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
ASIC1P78348 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
ASIC1P78348 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC18.03■□□□□ 0.48
ASIC1P78348 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
ASIC1P78348 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 54.5 ms