Protein–RNA interactions for Protein: P68431

HIST1H3A, Histone H3.1, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H3AP68431 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
HIST1H3AP68431 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
HIST1H3AP68431 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
HIST1H3AP68431 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
HIST1H3AP68431 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
HIST1H3AP68431 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
HIST1H3AP68431 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
HIST1H3AP68431 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC14.13□□□□□ -0.15
HIST1H3AP68431 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
HIST1H3AP68431 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
HIST1H3AP68431 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
HIST1H3AP68431 DRC7-201ENST00000336825 2680 ntAPPRIS ALT2 TSL 2 BASIC14.13□□□□□ -0.15
HIST1H3AP68431 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC14.13□□□□□ -0.15
HIST1H3AP68431 RBPJ-205ENST00000355476 5990 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
HIST1H3AP68431 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC14.13□□□□□ -0.15
HIST1H3AP68431 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC14.13□□□□□ -0.15
HIST1H3AP68431 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
HIST1H3AP68431 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
HIST1H3AP68431 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
HIST1H3AP68431 LEMD3-201ENST00000308330 4764 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
HIST1H3AP68431 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC14.13□□□□□ -0.15
HIST1H3AP68431 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
HIST1H3AP68431 AC103702.1-201ENST00000548801 2630 ntBASIC14.12□□□□□ -0.15
HIST1H3AP68431 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC14.12□□□□□ -0.15
HIST1H3AP68431 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
HIST1H3AP68431 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
HIST1H3AP68431 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
HIST1H3AP68431 TGFBR2-202ENST00000359013 4605 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
HIST1H3AP68431 FZD4-201ENST00000531380 7383 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
HIST1H3AP68431 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
HIST1H3AP68431 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
HIST1H3AP68431 GSPT1-202ENST00000434724 7105 ntAPPRIS P4 TSL 1 (best) BASIC14.12□□□□□ -0.15
HIST1H3AP68431 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
HIST1H3AP68431 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
HIST1H3AP68431 LZTS1-202ENST00000381569 5706 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
HIST1H3AP68431 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
HIST1H3AP68431 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC14.12□□□□□ -0.15
HIST1H3AP68431 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
HIST1H3AP68431 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
HIST1H3AP68431 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC14.12□□□□□ -0.15
HIST1H3AP68431 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
HIST1H3AP68431 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
HIST1H3AP68431 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
HIST1H3AP68431 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
HIST1H3AP68431 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
HIST1H3AP68431 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
HIST1H3AP68431 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC14.12□□□□□ -0.15
HIST1H3AP68431 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC14.12□□□□□ -0.15
HIST1H3AP68431 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
HIST1H3AP68431 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC14.12□□□□□ -0.15
HIST1H3AP68431 DNAJB3-201ENST00000446806 729 ntBASIC14.12□□□□□ -0.15
HIST1H3AP68431 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC14.12□□□□□ -0.15
HIST1H3AP68431 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC14.12□□□□□ -0.15
HIST1H3AP68431 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
HIST1H3AP68431 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC14.12□□□□□ -0.15
HIST1H3AP68431 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC14.12□□□□□ -0.15
HIST1H3AP68431 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC14.12□□□□□ -0.15
HIST1H3AP68431 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC14.12□□□□□ -0.15
HIST1H3AP68431 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC14.12□□□□□ -0.15
HIST1H3AP68431 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC14.12□□□□□ -0.15
HIST1H3AP68431 AL691432.1-201ENST00000596308 1422 ntBASIC14.12□□□□□ -0.15
HIST1H3AP68431 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
HIST1H3AP68431 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
HIST1H3AP68431 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
HIST1H3AP68431 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC14.12□□□□□ -0.15
HIST1H3AP68431 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
HIST1H3AP68431 NHS-201ENST00000380060 8761 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
HIST1H3AP68431 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
HIST1H3AP68431 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
HIST1H3AP68431 VILL-207ENST00000465644 1857 ntTSL 5 BASIC14.12□□□□□ -0.15
HIST1H3AP68431 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC14.12□□□□□ -0.15
HIST1H3AP68431 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
HIST1H3AP68431 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC14.12□□□□□ -0.15
HIST1H3AP68431 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
HIST1H3AP68431 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
HIST1H3AP68431 PHKG2-204ENST00000563588 5539 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
HIST1H3AP68431 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
HIST1H3AP68431 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
HIST1H3AP68431 HMGA2-210ENST00000541363 8094 ntAPPRIS ALT1 TSL 1 (best) BASIC14.12□□□□□ -0.15
HIST1H3AP68431 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
HIST1H3AP68431 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
HIST1H3AP68431 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
HIST1H3AP68431 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
HIST1H3AP68431 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
HIST1H3AP68431 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
HIST1H3AP68431 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
HIST1H3AP68431 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
HIST1H3AP68431 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC14.11□□□□□ -0.15
HIST1H3AP68431 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC14.11□□□□□ -0.15
HIST1H3AP68431 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
HIST1H3AP68431 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC14.11□□□□□ -0.15
HIST1H3AP68431 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
HIST1H3AP68431 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
HIST1H3AP68431 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
HIST1H3AP68431 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
HIST1H3AP68431 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
HIST1H3AP68431 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
HIST1H3AP68431 HLA-H-201ENST00000383620 1096 ntBASIC14.11□□□□□ -0.15
HIST1H3AP68431 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
HIST1H3AP68431 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC14.11□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 85.8 ms