Protein–RNA interactions for Protein: P61129

ZC3H6, Zinc finger CCCH domain-containing protein 6, humanhuman

Known RBP Predictions only

Length 1,189 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H6P61129 SLED1-202ENST00000512051 380 ntBASIC21.32■■□□□ 1
ZC3H6P61129 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC21.32■■□□□ 1
ZC3H6P61129 PPA1-206ENST00000625364 644 ntTSL 5 BASIC21.32■■□□□ 1
ZC3H6P61129 KAT8-201ENST00000219797 1525 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
ZC3H6P61129 ZBTB45P2-201ENST00000452245 1531 ntBASIC21.32■■□□□ 1
ZC3H6P61129 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC21.32■■□□□ 1
ZC3H6P61129 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC21.32■■□□□ 1
ZC3H6P61129 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC21.32■■□□□ 1
ZC3H6P61129 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC21.32■■□□□ 1
ZC3H6P61129 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC21.32■■□□□ 1
ZC3H6P61129 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
ZC3H6P61129 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
ZC3H6P61129 MRPL11-201ENST00000310999 1605 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
ZC3H6P61129 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC21.32■■□□□ 1
ZC3H6P61129 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC21.32■■□□□ 1
ZC3H6P61129 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC21.32■■□□□ 1
ZC3H6P61129 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC21.32■■□□□ 1
ZC3H6P61129 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
ZC3H6P61129 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC21.32■■□□□ 1
ZC3H6P61129 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
ZC3H6P61129 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC21.31■■□□□ 1
ZC3H6P61129 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC21.31■■□□□ 1
ZC3H6P61129 OSTF1-201ENST00000346234 1319 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
ZC3H6P61129 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC21.31■■□□□ 1
ZC3H6P61129 ABCC9-203ENST00000326684 1693 ntTSL 1 (best) BASIC21.31■■□□□ 1
ZC3H6P61129 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC21.31■■□□□ 1
ZC3H6P61129 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC21.31■■□□□ 1
ZC3H6P61129 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
ZC3H6P61129 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
ZC3H6P61129 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC21.31■■□□□ 1
ZC3H6P61129 AC105020.1-201ENST00000435356 2205 ntBASIC21.31■■□□□ 1
ZC3H6P61129 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC21.31■■□□□ 1
ZC3H6P61129 C1orf123-201ENST00000294360 1085 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
ZC3H6P61129 KLK1-201ENST00000301420 866 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
ZC3H6P61129 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC21.31■■□□□ 1
ZC3H6P61129 C9orf16-201ENST00000372994 713 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
ZC3H6P61129 HIST1H2AH-201ENST00000377459 387 ntAPPRIS P1 BASIC21.31■■□□□ 1
ZC3H6P61129 C1QTNF6-203ENST00000434784 975 ntTSL 3 BASIC21.31■■□□□ 1
ZC3H6P61129 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC21.31■■□□□ 1
ZC3H6P61129 AC104596.1-201ENST00000507826 579 ntTSL 4 BASIC21.31■■□□□ 1
ZC3H6P61129 SELENOW-201ENST00000509570 881 ntTSL 5 BASIC21.31■■□□□ 1
ZC3H6P61129 UEVLD-212ENST00000541984 755 ntTSL 3 BASIC21.31■■□□□ 1
ZC3H6P61129 RETN-203ENST00000629642 400 ntTSL 5 BASIC21.31■■□□□ 1
ZC3H6P61129 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC21.31■■□□□ 1
ZC3H6P61129 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC21.31■■□□□ 1
ZC3H6P61129 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
ZC3H6P61129 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC21.31■■□□□ 1
ZC3H6P61129 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC21.31■■□□□ 1
ZC3H6P61129 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
ZC3H6P61129 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
ZC3H6P61129 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC21.31■■□□□ 1
ZC3H6P61129 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC21.3■■□□□ 1
ZC3H6P61129 ENO3-206ENST00000519584 1322 ntTSL 2 BASIC21.3■■□□□ 1
ZC3H6P61129 HLA-A-202ENST00000376806 1854 ntBASIC21.3■■□□□ 1
ZC3H6P61129 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC21.3■■□□□ 1
ZC3H6P61129 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC21.3■■□□□ 1
ZC3H6P61129 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
ZC3H6P61129 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC21.3■■□□□ 1
ZC3H6P61129 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC21.3■■□□□ 1
ZC3H6P61129 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC21.3■■□□□ 1
ZC3H6P61129 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
ZC3H6P61129 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC21.3■■□□□ 1
ZC3H6P61129 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
ZC3H6P61129 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC21.3■■□□□ 1
ZC3H6P61129 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC21.3■■□□□ 1
ZC3H6P61129 LARGE-AS1-202ENST00000424291 1065 ntTSL 1 (best) BASIC21.3■■□□□ 1
ZC3H6P61129 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC21.3■■□□□ 1
ZC3H6P61129 U82695.1-202ENST00000428676 700 ntTSL 2 BASIC21.3■■□□□ 1
ZC3H6P61129 CDKN2AIP-205ENST00000510928 860 ntTSL 2 BASIC21.3■■□□□ 1
ZC3H6P61129 PAFAH1B3-202ENST00000538771 1098 ntAPPRIS P1 TSL 2 BASIC21.3■■□□□ 1
ZC3H6P61129 GPX4-206ENST00000588919 803 ntTSL 2 BASIC21.3■■□□□ 1
ZC3H6P61129 AL021578.1-201ENST00000613646 709 ntBASIC21.3■■□□□ 1
ZC3H6P61129 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC21.3■■□□□ 1
ZC3H6P61129 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC21.3■■□□□ 1
ZC3H6P61129 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC21.3■■□□□ 1
ZC3H6P61129 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC21.3■■□□□ 1
ZC3H6P61129 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC21.3■■□□□ 1
ZC3H6P61129 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC21.3■■□□□ 1
ZC3H6P61129 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC21.3■■□□□ 1
ZC3H6P61129 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC21.3■■□□□ 1
ZC3H6P61129 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
ZC3H6P61129 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
ZC3H6P61129 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
ZC3H6P61129 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC21.3■■□□□ 1
ZC3H6P61129 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC21.29■■□□□ 1
ZC3H6P61129 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC21.29■■□□□ 1
ZC3H6P61129 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
ZC3H6P61129 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC21.29■■□□□ 1
ZC3H6P61129 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
ZC3H6P61129 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC21.29■■□□□ 1
ZC3H6P61129 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
ZC3H6P61129 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC21.29■■□□□ 1
ZC3H6P61129 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC21.29■■□□□ 1
ZC3H6P61129 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC21.29■■□□□ 1
ZC3H6P61129 HEBP1-201ENST00000014930 1173 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
ZC3H6P61129 SH3BGR-201ENST00000333634 1251 ntAPPRIS P2 TSL 1 (best) BASIC21.29■■□□□ 1
ZC3H6P61129 RAB4B-201ENST00000357052 1133 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
ZC3H6P61129 AL022323.1-201ENST00000366110 957 ntTSL 1 (best) BASIC21.29■■□□□ 1
ZC3H6P61129 AC092506.1-202ENST00000401022 528 ntBASIC21.29■■□□□ 1
ZC3H6P61129 AC006003.1-201ENST00000448541 613 ntTSL 4 BASIC21.29■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 43 ms