Protein–RNA interactions for Protein: P59942

MCCD1, Mitochondrial coiled-coil domain protein 1, humanhuman

Predicted RBP Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MCCD1P59942 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC17.16■□□□□ 0.34
MCCD1P59942 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC17.16■□□□□ 0.34
MCCD1P59942 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC17.16■□□□□ 0.34
MCCD1P59942 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
MCCD1P59942 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
MCCD1P59942 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
MCCD1P59942 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC17.16■□□□□ 0.34
MCCD1P59942 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC17.16■□□□□ 0.34
MCCD1P59942 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC17.16■□□□□ 0.34
MCCD1P59942 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC17.16■□□□□ 0.34
MCCD1P59942 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
MCCD1P59942 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
MCCD1P59942 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
MCCD1P59942 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
MCCD1P59942 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
MCCD1P59942 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC17.15■□□□□ 0.34
MCCD1P59942 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
MCCD1P59942 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
MCCD1P59942 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC17.15■□□□□ 0.34
MCCD1P59942 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
MCCD1P59942 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
MCCD1P59942 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC17.15■□□□□ 0.34
MCCD1P59942 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
MCCD1P59942 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC17.15■□□□□ 0.34
MCCD1P59942 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
MCCD1P59942 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
MCCD1P59942 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
MCCD1P59942 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
MCCD1P59942 AC009477.1-201ENST00000452936 217 ntBASIC17.15■□□□□ 0.34
MCCD1P59942 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC17.15■□□□□ 0.34
MCCD1P59942 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC17.15■□□□□ 0.34
MCCD1P59942 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC17.15■□□□□ 0.34
MCCD1P59942 AC093028.1-201ENST00000622998 982 ntBASIC17.15■□□□□ 0.34
MCCD1P59942 AL590560.3-201ENST00000623350 461 ntBASIC17.15■□□□□ 0.34
MCCD1P59942 AC073592.8-201ENST00000624126 511 ntBASIC17.15■□□□□ 0.34
MCCD1P59942 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC17.15■□□□□ 0.34
MCCD1P59942 HCG11-201ENST00000411553 5696 ntBASIC17.15■□□□□ 0.34
MCCD1P59942 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
MCCD1P59942 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC17.15■□□□□ 0.34
MCCD1P59942 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC17.15■□□□□ 0.34
MCCD1P59942 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC17.15■□□□□ 0.34
MCCD1P59942 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC17.15■□□□□ 0.34
MCCD1P59942 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC17.15■□□□□ 0.34
MCCD1P59942 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
MCCD1P59942 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC17.14■□□□□ 0.34
MCCD1P59942 AC127383.1-201ENST00000444697 1800 ntBASIC17.14■□□□□ 0.34
MCCD1P59942 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC17.14■□□□□ 0.33
MCCD1P59942 SSR4P1-203ENST00000599569 2260 ntBASIC17.14■□□□□ 0.33
MCCD1P59942 AC079328.2-201ENST00000561241 3354 ntBASIC17.14■□□□□ 0.33
MCCD1P59942 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
MCCD1P59942 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
MCCD1P59942 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC17.14■□□□□ 0.33
MCCD1P59942 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
MCCD1P59942 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC17.14■□□□□ 0.33
MCCD1P59942 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
MCCD1P59942 AC092384.3-202ENST00000564646 2873 ntBASIC17.14■□□□□ 0.33
MCCD1P59942 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
MCCD1P59942 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC17.14■□□□□ 0.33
MCCD1P59942 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC17.14■□□□□ 0.33
MCCD1P59942 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
MCCD1P59942 BAD-202ENST00000394531 631 ntTSL 3 BASIC17.14■□□□□ 0.33
MCCD1P59942 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC17.14■□□□□ 0.33
MCCD1P59942 AC107890.1-201ENST00000422478 521 ntBASIC17.14■□□□□ 0.33
MCCD1P59942 SERBP1P3-201ENST00000459980 809 ntBASIC17.14■□□□□ 0.33
MCCD1P59942 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
MCCD1P59942 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
MCCD1P59942 AC069120.2-201ENST00000524091 540 ntBASIC17.14■□□□□ 0.33
MCCD1P59942 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
MCCD1P59942 BAD-207ENST00000544785 525 ntTSL 3 BASIC17.14■□□□□ 0.33
MCCD1P59942 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC17.14■□□□□ 0.33
MCCD1P59942 AC004449.1-201ENST00000564240 433 ntBASIC17.14■□□□□ 0.33
MCCD1P59942 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC17.14■□□□□ 0.33
MCCD1P59942 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC17.14■□□□□ 0.33
MCCD1P59942 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
MCCD1P59942 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
MCCD1P59942 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
MCCD1P59942 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
MCCD1P59942 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC17.14■□□□□ 0.33
MCCD1P59942 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
MCCD1P59942 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
MCCD1P59942 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC17.14■□□□□ 0.33
MCCD1P59942 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
MCCD1P59942 GRN-214ENST00000589265 1632 ntTSL 5 BASIC17.14■□□□□ 0.33
MCCD1P59942 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
MCCD1P59942 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
MCCD1P59942 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
MCCD1P59942 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
MCCD1P59942 LTF-203ENST00000426532 2494 ntTSL 2 BASIC17.13■□□□□ 0.33
MCCD1P59942 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
MCCD1P59942 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
MCCD1P59942 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
MCCD1P59942 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
MCCD1P59942 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC17.13■□□□□ 0.33
MCCD1P59942 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
MCCD1P59942 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
MCCD1P59942 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
MCCD1P59942 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
MCCD1P59942 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
MCCD1P59942 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
MCCD1P59942 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 36.1 ms