Protein–RNA interactions for Protein: P55316

FOXG1, Forkhead box protein G1, humanhuman

Predicted RBP Predictions only

Length 489 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXG1P55316 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC14.13□□□□□ -0.15
FOXG1P55316 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
FOXG1P55316 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
FOXG1P55316 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC14.13□□□□□ -0.15
FOXG1P55316 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC14.13□□□□□ -0.15
FOXG1P55316 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC14.13□□□□□ -0.15
FOXG1P55316 AC004890.2-204ENST00000481968 304 ntBASIC14.13□□□□□ -0.15
FOXG1P55316 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC14.13□□□□□ -0.15
FOXG1P55316 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
FOXG1P55316 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
FOXG1P55316 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
FOXG1P55316 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC14.13□□□□□ -0.15
FOXG1P55316 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
FOXG1P55316 AL844908.2-201ENST00000609461 460 ntBASIC14.13□□□□□ -0.15
FOXG1P55316 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC14.13□□□□□ -0.15
FOXG1P55316 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
FOXG1P55316 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
FOXG1P55316 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC14.13□□□□□ -0.15
FOXG1P55316 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC14.13□□□□□ -0.15
FOXG1P55316 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC14.13□□□□□ -0.15
FOXG1P55316 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
FOXG1P55316 AC024909.3-201ENST00000611513 2257 ntBASIC14.13□□□□□ -0.15
FOXG1P55316 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
FOXG1P55316 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
FOXG1P55316 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC14.13□□□□□ -0.15
FOXG1P55316 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
FOXG1P55316 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
FOXG1P55316 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
FOXG1P55316 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
FOXG1P55316 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC14.13□□□□□ -0.15
FOXG1P55316 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC14.13□□□□□ -0.15
FOXG1P55316 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC14.12□□□□□ -0.15
FOXG1P55316 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC14.12□□□□□ -0.15
FOXG1P55316 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
FOXG1P55316 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC14.12□□□□□ -0.15
FOXG1P55316 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
FOXG1P55316 AL391005.1-201ENST00000623953 2435 ntBASIC14.12□□□□□ -0.15
FOXG1P55316 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
FOXG1P55316 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC14.12□□□□□ -0.15
FOXG1P55316 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
FOXG1P55316 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC14.12□□□□□ -0.15
FOXG1P55316 AC018695.7-201ENST00000624587 2492 ntBASIC14.12□□□□□ -0.15
FOXG1P55316 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
FOXG1P55316 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
FOXG1P55316 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
FOXG1P55316 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
FOXG1P55316 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC14.12□□□□□ -0.15
FOXG1P55316 BASP1P1-201ENST00000430708 665 ntBASIC14.12□□□□□ -0.15
FOXG1P55316 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC14.12□□□□□ -0.15
FOXG1P55316 HIST3H2BA-201ENST00000436555 524 ntBASIC14.12□□□□□ -0.15
FOXG1P55316 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC14.12□□□□□ -0.15
FOXG1P55316 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
FOXG1P55316 NAA60-208ENST00000570819 833 ntTSL 2 BASIC14.12□□□□□ -0.15
FOXG1P55316 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
FOXG1P55316 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC14.12□□□□□ -0.15
FOXG1P55316 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
FOXG1P55316 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC14.12□□□□□ -0.15
FOXG1P55316 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
FOXG1P55316 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC14.12□□□□□ -0.15
FOXG1P55316 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
FOXG1P55316 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC14.12□□□□□ -0.15
FOXG1P55316 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC14.12□□□□□ -0.15
FOXG1P55316 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC14.12□□□□□ -0.15
FOXG1P55316 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
FOXG1P55316 SUPT20HL2-201ENST00000486479 2409 ntBASIC14.12□□□□□ -0.15
FOXG1P55316 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
FOXG1P55316 AC008741.2-201ENST00000612792 3115 ntBASIC14.12□□□□□ -0.15
FOXG1P55316 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC14.12□□□□□ -0.15
FOXG1P55316 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
FOXG1P55316 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
FOXG1P55316 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC14.12□□□□□ -0.15
FOXG1P55316 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
FOXG1P55316 AC018892.3-201ENST00000623986 2499 ntBASIC14.12□□□□□ -0.15
FOXG1P55316 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC14.11□□□□□ -0.15
FOXG1P55316 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
FOXG1P55316 KRT8P12-202ENST00000472924 1397 ntBASIC14.11□□□□□ -0.15
FOXG1P55316 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC14.11□□□□□ -0.15
FOXG1P55316 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC14.11□□□□□ -0.15
FOXG1P55316 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
FOXG1P55316 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC14.11□□□□□ -0.15
FOXG1P55316 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC14.11□□□□□ -0.15
FOXG1P55316 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
FOXG1P55316 VMA21-202ENST00000370361 693 ntTSL 5 BASIC14.11□□□□□ -0.15
FOXG1P55316 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC14.11□□□□□ -0.15
FOXG1P55316 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
FOXG1P55316 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
FOXG1P55316 MIR661-201ENST00000384842 89 ntBASIC14.11□□□□□ -0.15
FOXG1P55316 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
FOXG1P55316 CENPM-206ENST00000407253 818 ntTSL 2 BASIC14.11□□□□□ -0.15
FOXG1P55316 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC14.11□□□□□ -0.15
FOXG1P55316 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC14.11□□□□□ -0.15
FOXG1P55316 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC14.11□□□□□ -0.15
FOXG1P55316 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC14.11□□□□□ -0.15
FOXG1P55316 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC14.11□□□□□ -0.15
FOXG1P55316 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC14.11□□□□□ -0.15
FOXG1P55316 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
FOXG1P55316 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
FOXG1P55316 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC14.11□□□□□ -0.15
FOXG1P55316 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC14.11□□□□□ -0.15
FOXG1P55316 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC14.11□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms