Protein–RNA interactions for Protein: P51788

CLCN2, Chloride channel protein 2, humanhuman

Predictions only

Length 898 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN2P51788 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CLCN2P51788 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CLCN2P51788 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
CLCN2P51788 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
CLCN2P51788 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC15.71■□□□□ 0.11
CLCN2P51788 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
CLCN2P51788 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC15.71■□□□□ 0.11
CLCN2P51788 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
CLCN2P51788 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC15.71■□□□□ 0.11
CLCN2P51788 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
CLCN2P51788 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC15.71■□□□□ 0.11
CLCN2P51788 DEGS2-201ENST00000305631 4352 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CLCN2P51788 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC15.71■□□□□ 0.11
CLCN2P51788 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC15.71■□□□□ 0.11
CLCN2P51788 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CLCN2P51788 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC15.71■□□□□ 0.11
CLCN2P51788 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
CLCN2P51788 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CLCN2P51788 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC15.71■□□□□ 0.11
CLCN2P51788 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
CLCN2P51788 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
CLCN2P51788 RPSAP43-201ENST00000402237 625 ntBASIC15.71■□□□□ 0.11
CLCN2P51788 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC15.71■□□□□ 0.11
CLCN2P51788 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
CLCN2P51788 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC15.71■□□□□ 0.11
CLCN2P51788 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
CLCN2P51788 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC15.71■□□□□ 0.11
CLCN2P51788 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC15.71■□□□□ 0.11
CLCN2P51788 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC15.71■□□□□ 0.11
CLCN2P51788 DAB2IP-201ENST00000259371 5469 ntAPPRIS P4 TSL 5 BASIC15.71■□□□□ 0.11
CLCN2P51788 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
CLCN2P51788 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
CLCN2P51788 SOGA3-201ENST00000465909 3756 ntTSL 5 BASIC15.71■□□□□ 0.11
CLCN2P51788 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
CLCN2P51788 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
CLCN2P51788 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC15.71■□□□□ 0.11
CLCN2P51788 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC15.71■□□□□ 0.11
CLCN2P51788 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
CLCN2P51788 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
CLCN2P51788 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC15.71■□□□□ 0.1
CLCN2P51788 TGFBR2-202ENST00000359013 4605 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.1
CLCN2P51788 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC15.71■□□□□ 0.1
CLCN2P51788 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC15.7■□□□□ 0.1
CLCN2P51788 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CLCN2P51788 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CLCN2P51788 AC010491.1-201ENST00000563101 2797 ntBASIC15.7■□□□□ 0.1
CLCN2P51788 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC15.7■□□□□ 0.1
CLCN2P51788 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC15.7■□□□□ 0.1
CLCN2P51788 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
CLCN2P51788 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC15.7■□□□□ 0.1
CLCN2P51788 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC15.7■□□□□ 0.1
CLCN2P51788 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CLCN2P51788 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CLCN2P51788 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CLCN2P51788 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
CLCN2P51788 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC15.7■□□□□ 0.1
CLCN2P51788 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
CLCN2P51788 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CLCN2P51788 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CLCN2P51788 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC15.7■□□□□ 0.1
CLCN2P51788 PODN-201ENST00000312553 3010 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
CLCN2P51788 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CLCN2P51788 APAF1-201ENST00000333991 4539 ntTSL 5 BASIC15.7■□□□□ 0.1
CLCN2P51788 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CLCN2P51788 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CLCN2P51788 COA5-202ENST00000409997 557 ntTSL 4 BASIC15.7■□□□□ 0.1
CLCN2P51788 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC15.7■□□□□ 0.1
CLCN2P51788 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC15.7■□□□□ 0.1
CLCN2P51788 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CLCN2P51788 AL031432.2-201ENST00000566714 459 ntBASIC15.7■□□□□ 0.1
CLCN2P51788 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC15.7■□□□□ 0.1
CLCN2P51788 AL928711.1-201ENST00000570165 459 ntBASIC15.7■□□□□ 0.1
CLCN2P51788 AC091167.2-201ENST00000579581 588 ntBASIC15.7■□□□□ 0.1
CLCN2P51788 MIR4515-201ENST00000584082 81 ntBASIC15.7■□□□□ 0.1
CLCN2P51788 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CLCN2P51788 AC068137.2-201ENST00000605408 478 ntBASIC15.7■□□□□ 0.1
CLCN2P51788 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC15.7■□□□□ 0.1
CLCN2P51788 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CLCN2P51788 LMNA-201ENST00000347559 3137 ntTSL 5 BASIC15.7■□□□□ 0.1
CLCN2P51788 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CLCN2P51788 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CLCN2P51788 PNPLA5-201ENST00000216177 2539 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CLCN2P51788 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CLCN2P51788 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC15.7■□□□□ 0.1
CLCN2P51788 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CLCN2P51788 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
CLCN2P51788 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
CLCN2P51788 TBK1-201ENST00000331710 3256 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CLCN2P51788 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
CLCN2P51788 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC15.7■□□□□ 0.1
CLCN2P51788 FYCO1-205ENST00000535325 8578 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
CLCN2P51788 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC15.69■□□□□ 0.1
CLCN2P51788 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
CLCN2P51788 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CLCN2P51788 EPS8L2-223ENST00000533256 3266 ntAPPRIS P2 TSL 5 BASIC15.69■□□□□ 0.1
CLCN2P51788 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CLCN2P51788 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CLCN2P51788 TBCD-202ENST00000539345 3975 ntTSL 5 BASIC15.69■□□□□ 0.1
CLCN2P51788 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
CLCN2P51788 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 37.3 ms