Protein–RNA interactions for Protein: P37840

SNCA, Alpha-synuclein, humanhuman

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAP37840 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
SNCAP37840 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
SNCAP37840 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC13.38□□□□□ -0.27
SNCAP37840 ISCU-203ENST00000431221 799 ntTSL 2 BASIC13.38□□□□□ -0.27
SNCAP37840 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC13.38□□□□□ -0.27
SNCAP37840 BX005266.1-201ENST00000473402 457 ntBASIC13.38□□□□□ -0.27
SNCAP37840 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC13.38□□□□□ -0.27
SNCAP37840 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC13.38□□□□□ -0.27
SNCAP37840 FICD-205ENST00000552758 603 ntTSL 2 BASIC13.38□□□□□ -0.27
SNCAP37840 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC13.38□□□□□ -0.27
SNCAP37840 AC138894.3-201ENST00000603787 634 ntBASIC13.38□□□□□ -0.27
SNCAP37840 AC092119.3-201ENST00000612618 583 ntBASIC13.38□□□□□ -0.27
SNCAP37840 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
SNCAP37840 PATZ1-204ENST00000405309 3711 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
SNCAP37840 BAG4-201ENST00000287322 4453 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
SNCAP37840 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
SNCAP37840 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC13.38□□□□□ -0.27
SNCAP37840 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC13.38□□□□□ -0.27
SNCAP37840 YTHDC1-202ENST00000355665 3244 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
SNCAP37840 ARPP19-202ENST00000561650 3245 ntTSL 2 BASIC13.38□□□□□ -0.27
SNCAP37840 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC13.38□□□□□ -0.27
SNCAP37840 COL17A1-201ENST00000353479 5734 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
SNCAP37840 OSMR-201ENST00000274276 5539 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
SNCAP37840 GPRASP1-205ENST00000537097 5980 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
SNCAP37840 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
SNCAP37840 PI16-203ENST00000611814 2083 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
SNCAP37840 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
SNCAP37840 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
SNCAP37840 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
SNCAP37840 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC13.38□□□□□ -0.27
SNCAP37840 AP4E1-201ENST00000261842 6758 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
SNCAP37840 FHDC1-202ENST00000511601 6583 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
SNCAP37840 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
SNCAP37840 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
SNCAP37840 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
SNCAP37840 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
SNCAP37840 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
SNCAP37840 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
SNCAP37840 SSR4P1-203ENST00000599569 2260 ntBASIC13.37□□□□□ -0.27
SNCAP37840 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC13.37□□□□□ -0.27
SNCAP37840 CLEC18A-201ENST00000288040 2155 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
SNCAP37840 TOP3BP1-201ENST00000420768 1380 ntBASIC13.37□□□□□ -0.27
SNCAP37840 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
SNCAP37840 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
SNCAP37840 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
SNCAP37840 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC13.37□□□□□ -0.27
SNCAP37840 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
SNCAP37840 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC13.37□□□□□ -0.27
SNCAP37840 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC13.37□□□□□ -0.27
SNCAP37840 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
SNCAP37840 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC13.37□□□□□ -0.27
SNCAP37840 AC132008.2-207ENST00000454517 770 ntBASIC13.37□□□□□ -0.27
SNCAP37840 MIR3180-1-201ENST00000580374 94 ntBASIC13.37□□□□□ -0.27
SNCAP37840 MIR3180-3-201ENST00000584616 94 ntBASIC13.37□□□□□ -0.27
SNCAP37840 AC091076.1-201ENST00000610741 619 ntBASIC13.37□□□□□ -0.27
SNCAP37840 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC13.37□□□□□ -0.27
SNCAP37840 GSN-206ENST00000394353 2311 ntTSL 2 BASIC13.37□□□□□ -0.27
SNCAP37840 WDR20-205ENST00000424963 2695 ntTSL 5 BASIC13.37□□□□□ -0.27
SNCAP37840 TRAF3-202ENST00000351691 2239 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
SNCAP37840 COMP-201ENST00000222271 2461 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
SNCAP37840 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
SNCAP37840 SLC11A2-204ENST00000541174 2470 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
SNCAP37840 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
SNCAP37840 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
SNCAP37840 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC13.37□□□□□ -0.27
SNCAP37840 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC13.37□□□□□ -0.27
SNCAP37840 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC13.37□□□□□ -0.27
SNCAP37840 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
SNCAP37840 VWA7-201ENST00000375688 2881 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
SNCAP37840 PRDM16-203ENST00000378391 5447 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
SNCAP37840 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
SNCAP37840 AC112504.1-201ENST00000623415 1841 ntBASIC13.36□□□□□ -0.27
SNCAP37840 FBXO45-202ENST00000440469 3689 ntTSL 2 BASIC13.36□□□□□ -0.27
SNCAP37840 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC13.36□□□□□ -0.27
SNCAP37840 FARP1-214ENST00000595437 4926 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
SNCAP37840 FAM149B1-201ENST00000242505 5408 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
SNCAP37840 ABHD14B-201ENST00000315877 2236 ntTSL 5 BASIC13.36□□□□□ -0.27
SNCAP37840 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
SNCAP37840 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
SNCAP37840 IL9R-202ENST00000369423 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
SNCAP37840 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC13.36□□□□□ -0.27
SNCAP37840 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
SNCAP37840 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
SNCAP37840 FAM210CP-201ENST00000445714 574 ntBASIC13.36□□□□□ -0.27
SNCAP37840 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC13.36□□□□□ -0.27
SNCAP37840 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC13.36□□□□□ -0.27
SNCAP37840 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC13.36□□□□□ -0.27
SNCAP37840 AL589182.2-201ENST00000619332 1049 ntBASIC13.36□□□□□ -0.27
SNCAP37840 AL139288.1-201ENST00000623748 933 ntBASIC13.36□□□□□ -0.27
SNCAP37840 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC13.36□□□□□ -0.27
SNCAP37840 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
SNCAP37840 KIF26B-202ENST00000407071 7287 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
SNCAP37840 SLC4A9-203ENST00000506545 2838 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
SNCAP37840 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
SNCAP37840 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
SNCAP37840 PXN-221ENST00000637617 3246 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
SNCAP37840 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
SNCAP37840 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
SNCAP37840 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC13.36□□□□□ -0.27
SNCAP37840 ASIC4-202ENST00000358078 2741 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 47.5 ms