Protein–RNA interactions for Protein: P35913

PDE6B, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta, humanhuman

Predictions only

Length 854 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6BP35913 C9orf16-201ENST00000372994 713 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
PDE6BP35913 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
PDE6BP35913 NGDN-202ENST00000408901 1143 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
PDE6BP35913 LINC01665-201ENST00000422917 1241 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
PDE6BP35913 RFPL4A-201ENST00000434937 1035 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
PDE6BP35913 ST8SIA2-202ENST00000539113 1089 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
PDE6BP35913 AC023310.1-201ENST00000554836 735 ntBASIC19.7■□□□□ 0.74
PDE6BP35913 LINC02028-216ENST00000609015 732 ntTSL 5 BASIC19.7■□□□□ 0.74
PDE6BP35913 LARP4-220ENST00000615080 856 ntTSL 5 BASIC19.7■□□□□ 0.74
PDE6BP35913 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC19.7■□□□□ 0.74
PDE6BP35913 CR381653.1-201ENST00000622961 812 ntTSL 3 BASIC19.7■□□□□ 0.74
PDE6BP35913 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
PDE6BP35913 RGS6-218ENST00000556437 1689 ntAPPRIS ALT1 TSL 1 (best) BASIC19.7■□□□□ 0.74
PDE6BP35913 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
PDE6BP35913 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC19.7■□□□□ 0.74
PDE6BP35913 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
PDE6BP35913 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC19.7■□□□□ 0.74
PDE6BP35913 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
PDE6BP35913 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
PDE6BP35913 ZBTB45P2-201ENST00000452245 1531 ntBASIC19.7■□□□□ 0.74
PDE6BP35913 CHST10-203ENST00000409701 1338 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
PDE6BP35913 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
PDE6BP35913 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC19.7■□□□□ 0.74
PDE6BP35913 GCK-202ENST00000345378 2421 ntTSL 2 BASIC19.7■□□□□ 0.74
PDE6BP35913 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
PDE6BP35913 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
PDE6BP35913 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
PDE6BP35913 HARS2-202ENST00000448069 1426 ntTSL 2 BASIC19.69■□□□□ 0.74
PDE6BP35913 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
PDE6BP35913 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
PDE6BP35913 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
PDE6BP35913 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
PDE6BP35913 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
PDE6BP35913 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
PDE6BP35913 C3orf22-201ENST00000318225 1000 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
PDE6BP35913 LARGE-AS1-202ENST00000424291 1065 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
PDE6BP35913 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC19.69■□□□□ 0.74
PDE6BP35913 AL021546.1-201ENST00000551806 552 ntAPPRIS P1 TSL 3 BASIC19.69■□□□□ 0.74
PDE6BP35913 TUBB8-202ENST00000562809 820 ntTSL 5 BASIC19.69■□□□□ 0.74
PDE6BP35913 LINC02109-201ENST00000565798 869 ntTSL 5 BASIC19.69■□□□□ 0.74
PDE6BP35913 TSR1-204ENST00000576112 1290 ntTSL 5 BASIC19.69■□□□□ 0.74
PDE6BP35913 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
PDE6BP35913 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
PDE6BP35913 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
PDE6BP35913 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC19.69■□□□□ 0.74
PDE6BP35913 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
PDE6BP35913 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC19.69■□□□□ 0.74
PDE6BP35913 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
PDE6BP35913 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
PDE6BP35913 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
PDE6BP35913 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC19.68■□□□□ 0.74
PDE6BP35913 KCNJ2-202ENST00000535240 1685 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
PDE6BP35913 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC19.68■□□□□ 0.74
PDE6BP35913 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
PDE6BP35913 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
PDE6BP35913 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
PDE6BP35913 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC19.68■□□□□ 0.74
PDE6BP35913 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC19.68■□□□□ 0.74
PDE6BP35913 NF2-208ENST00000403435 2568 ntTSL 5 BASIC19.68■□□□□ 0.74
PDE6BP35913 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
PDE6BP35913 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
PDE6BP35913 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
PDE6BP35913 AC092614.1-201ENST00000419640 909 ntTSL 3 BASIC19.68■□□□□ 0.74
PDE6BP35913 CNN2P8-201ENST00000421872 913 ntBASIC19.68■□□□□ 0.74
PDE6BP35913 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC19.68■□□□□ 0.74
PDE6BP35913 ZNF527-203ENST00000483919 1142 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
PDE6BP35913 SELENOW-201ENST00000509570 881 ntTSL 5 BASIC19.68■□□□□ 0.74
PDE6BP35913 AC126768.2-201ENST00000511693 718 ntTSL 3 BASIC19.68■□□□□ 0.74
PDE6BP35913 FAM86HP-204ENST00000513466 959 ntBASIC19.68■□□□□ 0.74
PDE6BP35913 AC026495.1-203ENST00000557528 906 ntTSL 5 BASIC19.68■□□□□ 0.74
PDE6BP35913 AP003096.1-203ENST00000564469 563 ntTSL 3 BASIC19.68■□□□□ 0.74
PDE6BP35913 GNRHR2-203ENST00000581100 1187 ntBASIC19.68■□□□□ 0.74
PDE6BP35913 PLA2G4C-AS1-201ENST00000596552 568 ntTSL 3 BASIC19.68■□□□□ 0.74
PDE6BP35913 AL022328.3-201ENST00000607943 679 ntBASIC19.68■□□□□ 0.74
PDE6BP35913 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
PDE6BP35913 GTF2A1L-203ENST00000430487 1575 ntTSL 2 BASIC19.68■□□□□ 0.74
PDE6BP35913 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
PDE6BP35913 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
PDE6BP35913 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
PDE6BP35913 ENO3-206ENST00000519584 1322 ntTSL 2 BASIC19.68■□□□□ 0.74
PDE6BP35913 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC19.68■□□□□ 0.74
PDE6BP35913 CRCP-201ENST00000338592 1393 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
PDE6BP35913 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC19.68■□□□□ 0.74
PDE6BP35913 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC19.67■□□□□ 0.74
PDE6BP35913 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC19.67■□□□□ 0.74
PDE6BP35913 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
PDE6BP35913 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
PDE6BP35913 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
PDE6BP35913 OR6D1P-202ENST00000641007 5290 ntBASIC19.67■□□□□ 0.74
PDE6BP35913 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
PDE6BP35913 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
PDE6BP35913 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC19.67■□□□□ 0.74
PDE6BP35913 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
PDE6BP35913 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
PDE6BP35913 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
PDE6BP35913 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
PDE6BP35913 MIR326-201ENST00000362220 95 ntBASIC19.67■□□□□ 0.74
PDE6BP35913 FCGR1B-203ENST00000369384 1044 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
PDE6BP35913 VAMP1-203ENST00000400911 1068 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
PDE6BP35913 Z98752.1-201ENST00000442482 518 ntTSL 3 BASIC19.67■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 67.3 ms