Protein–RNA interactions for Protein: P31275

HOXC12, Homeobox protein Hox-C12, humanhuman

Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC12P31275 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
HOXC12P31275 CD1B-201ENST00000368168 1395 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
HOXC12P31275 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
HOXC12P31275 UBALD1-205ENST00000590891 2641 ntBASIC14.38□□□□□ -0.11
HOXC12P31275 SORCS1-201ENST00000263054 7272 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
HOXC12P31275 SLIT1-201ENST00000266058 7925 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
HOXC12P31275 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
HOXC12P31275 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
HOXC12P31275 AC022211.2-201ENST00000585075 2527 ntBASIC14.38□□□□□ -0.11
HOXC12P31275 AKNA-206ENST00000374088 5464 ntAPPRIS P2 TSL 2 BASIC14.38□□□□□ -0.11
HOXC12P31275 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
HOXC12P31275 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC14.38□□□□□ -0.11
HOXC12P31275 BLCAP-202ENST00000397131 633 ntAPPRIS P1 TSL 3 BASIC14.38□□□□□ -0.11
HOXC12P31275 BLCAP-203ENST00000397134 566 ntAPPRIS P1 TSL 4 BASIC14.38□□□□□ -0.11
HOXC12P31275 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC14.38□□□□□ -0.11
HOXC12P31275 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC14.38□□□□□ -0.11
HOXC12P31275 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC14.38□□□□□ -0.11
HOXC12P31275 HLA-V-201ENST00000429037 534 ntBASIC14.38□□□□□ -0.11
HOXC12P31275 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC14.38□□□□□ -0.11
HOXC12P31275 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
HOXC12P31275 STMN4-207ENST00000523048 1224 ntTSL 2 BASIC14.38□□□□□ -0.11
HOXC12P31275 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC14.38□□□□□ -0.11
HOXC12P31275 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC14.38□□□□□ -0.11
HOXC12P31275 MIR6080-201ENST00000617359 66 ntBASIC14.38□□□□□ -0.11
HOXC12P31275 PDLIM3-213ENST00000629667 1016 ntTSL 5 BASIC14.38□□□□□ -0.11
HOXC12P31275 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
HOXC12P31275 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
HOXC12P31275 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC14.38□□□□□ -0.11
HOXC12P31275 TMEM200C-202ENST00000581347 10638 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
HOXC12P31275 AC008677.1-201ENST00000519230 1561 ntBASIC14.38□□□□□ -0.11
HOXC12P31275 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
HOXC12P31275 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
HOXC12P31275 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC14.38□□□□□ -0.11
HOXC12P31275 TNRC18-203ENST00000399537 10572 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
HOXC12P31275 TNRC18-205ENST00000430969 10562 ntAPPRIS P2 TSL 5 BASIC14.38□□□□□ -0.11
HOXC12P31275 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
HOXC12P31275 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
HOXC12P31275 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
HOXC12P31275 AC097376.2-205ENST00000610159 5334 ntBASIC14.38□□□□□ -0.11
HOXC12P31275 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
HOXC12P31275 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC14.38□□□□□ -0.11
HOXC12P31275 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
HOXC12P31275 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
HOXC12P31275 U82695.1-201ENST00000635752 1889 ntBASIC14.38□□□□□ -0.11
HOXC12P31275 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
HOXC12P31275 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
HOXC12P31275 INPP5D-201ENST00000359570 5274 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
HOXC12P31275 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC14.37□□□□□ -0.11
HOXC12P31275 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
HOXC12P31275 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
HOXC12P31275 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC14.37□□□□□ -0.11
HOXC12P31275 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC14.37□□□□□ -0.11
HOXC12P31275 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
HOXC12P31275 DZANK1-202ENST00000329494 1389 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
HOXC12P31275 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
HOXC12P31275 ADCY6-201ENST00000307885 6464 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
HOXC12P31275 ELP1-201ENST00000374647 5905 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
HOXC12P31275 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC14.37□□□□□ -0.11
HOXC12P31275 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC14.37□□□□□ -0.11
HOXC12P31275 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
HOXC12P31275 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC14.37□□□□□ -0.11
HOXC12P31275 THOC7-201ENST00000295899 990 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
HOXC12P31275 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
HOXC12P31275 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
HOXC12P31275 GOLGA6L11P-201ENST00000417252 1298 ntBASIC14.37□□□□□ -0.11
HOXC12P31275 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC14.37□□□□□ -0.11
HOXC12P31275 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC14.37□□□□□ -0.11
HOXC12P31275 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC14.37□□□□□ -0.11
HOXC12P31275 RNA5SP410-201ENST00000516285 106 ntBASIC14.37□□□□□ -0.11
HOXC12P31275 IGHV3-42-201ENST00000520410 361 ntBASIC14.37□□□□□ -0.11
HOXC12P31275 CD4-210ENST00000541982 1187 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
HOXC12P31275 AC005544.2-201ENST00000579138 229 ntTSL 5 BASIC14.37□□□□□ -0.11
HOXC12P31275 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC14.37□□□□□ -0.11
HOXC12P31275 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC14.37□□□□□ -0.11
HOXC12P31275 AC073389.1-201ENST00000595595 795 ntBASIC14.37□□□□□ -0.11
HOXC12P31275 SPTSSB-204ENST00000617024 1292 ntBASIC14.37□□□□□ -0.11
HOXC12P31275 RAB34-224ENST00000636513 888 ntTSL 5 BASIC14.37□□□□□ -0.11
HOXC12P31275 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
HOXC12P31275 PLLP-205ENST00000613167 7578 ntTSL 5 BASIC14.37□□□□□ -0.11
HOXC12P31275 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
HOXC12P31275 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
HOXC12P31275 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC14.37□□□□□ -0.11
HOXC12P31275 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
HOXC12P31275 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
HOXC12P31275 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
HOXC12P31275 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC14.37□□□□□ -0.11
HOXC12P31275 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
HOXC12P31275 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC14.37□□□□□ -0.11
HOXC12P31275 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
HOXC12P31275 H6PD-203ENST00000602477 5590 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
HOXC12P31275 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
HOXC12P31275 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC14.37□□□□□ -0.11
HOXC12P31275 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC14.37□□□□□ -0.11
HOXC12P31275 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
HOXC12P31275 WWC2-201ENST00000403733 8826 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
HOXC12P31275 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
HOXC12P31275 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
HOXC12P31275 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC14.36□□□□□ -0.11
HOXC12P31275 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
HOXC12P31275 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC14.36□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 54.6 ms