Protein–RNA interactions for Protein: P29350

PTPN6, Tyrosine-protein phosphatase non-receptor type 6, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6P29350 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
PTPN6P29350 HAUS4P1-201ENST00000406739 1145 ntBASIC15.35■□□□□ 0.05
PTPN6P29350 FALEC-201ENST00000416894 566 ntTSL 3 BASIC15.35■□□□□ 0.05
PTPN6P29350 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC15.35■□□□□ 0.05
PTPN6P29350 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
PTPN6P29350 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC15.35■□□□□ 0.05
PTPN6P29350 THTPA-204ENST00000554970 569 ntTSL 4 BASIC15.35■□□□□ 0.05
PTPN6P29350 THTPA-206ENST00000556015 535 ntTSL 3 BASIC15.35■□□□□ 0.05
PTPN6P29350 AL009183.1-201ENST00000603760 355 ntBASIC15.35■□□□□ 0.05
PTPN6P29350 C20orf181-201ENST00000623918 480 ntBASIC15.35■□□□□ 0.05
PTPN6P29350 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
PTPN6P29350 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC15.35■□□□□ 0.05
PTPN6P29350 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
PTPN6P29350 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
PTPN6P29350 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC15.35■□□□□ 0.05
PTPN6P29350 REM2-202ENST00000536884 1331 ntTSL 2 BASIC15.35■□□□□ 0.05
PTPN6P29350 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC15.35■□□□□ 0.05
PTPN6P29350 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC15.35■□□□□ 0.05
PTPN6P29350 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
PTPN6P29350 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
PTPN6P29350 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC15.35■□□□□ 0.05
PTPN6P29350 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC15.35■□□□□ 0.05
PTPN6P29350 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
PTPN6P29350 CCDC187-205ENST00000638797 10126 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
PTPN6P29350 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
PTPN6P29350 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
PTPN6P29350 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC15.34■□□□□ 0.05
PTPN6P29350 AC136621.1-201ENST00000624017 2304 ntBASIC15.34■□□□□ 0.05
PTPN6P29350 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC15.34■□□□□ 0.05
PTPN6P29350 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
PTPN6P29350 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
PTPN6P29350 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
PTPN6P29350 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
PTPN6P29350 MAU2-201ENST00000262815 4994 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
PTPN6P29350 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
PTPN6P29350 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC15.34■□□□□ 0.05
PTPN6P29350 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC15.34■□□□□ 0.05
PTPN6P29350 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
PTPN6P29350 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC15.34■□□□□ 0.05
PTPN6P29350 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
PTPN6P29350 COA5-202ENST00000409997 557 ntTSL 4 BASIC15.34■□□□□ 0.05
PTPN6P29350 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC15.34■□□□□ 0.05
PTPN6P29350 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC15.34■□□□□ 0.05
PTPN6P29350 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC15.34■□□□□ 0.05
PTPN6P29350 AC245100.5-201ENST00000452108 331 ntBASIC15.34■□□□□ 0.05
PTPN6P29350 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
PTPN6P29350 ALG1L5P-201ENST00000482043 771 ntBASIC15.34■□□□□ 0.05
PTPN6P29350 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC15.34■□□□□ 0.05
PTPN6P29350 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC15.34■□□□□ 0.05
PTPN6P29350 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
PTPN6P29350 AC068137.2-201ENST00000605408 478 ntBASIC15.34■□□□□ 0.05
PTPN6P29350 GPALPP1-207ENST00000611650 899 ntBASIC15.34■□□□□ 0.05
PTPN6P29350 AC139530.3-201ENST00000620344 690 ntBASIC15.34■□□□□ 0.05
PTPN6P29350 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC15.34■□□□□ 0.05
PTPN6P29350 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
PTPN6P29350 SLC9A7P1-201ENST00000554295 3311 ntBASIC15.34■□□□□ 0.05
PTPN6P29350 AC092850.2-201ENST00000623821 2697 ntBASIC15.34■□□□□ 0.05
PTPN6P29350 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
PTPN6P29350 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC15.34■□□□□ 0.05
PTPN6P29350 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
PTPN6P29350 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
PTPN6P29350 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
PTPN6P29350 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
PTPN6P29350 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
PTPN6P29350 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
PTPN6P29350 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
PTPN6P29350 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC15.34■□□□□ 0.05
PTPN6P29350 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
PTPN6P29350 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
PTPN6P29350 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
PTPN6P29350 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC15.33■□□□□ 0.05
PTPN6P29350 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.05
PTPN6P29350 AC023824.1-201ENST00000562945 2975 ntBASIC15.33■□□□□ 0.05
PTPN6P29350 AC068418.2-201ENST00000577309 3703 ntBASIC15.33■□□□□ 0.05
PTPN6P29350 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
PTPN6P29350 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC15.33■□□□□ 0.05
PTPN6P29350 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
PTPN6P29350 AC011477.6-201ENST00000604980 1927 ntBASIC15.33■□□□□ 0.05
PTPN6P29350 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
PTPN6P29350 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC15.33■□□□□ 0.05
PTPN6P29350 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
PTPN6P29350 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC15.33■□□□□ 0.04
PTPN6P29350 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
PTPN6P29350 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
PTPN6P29350 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
PTPN6P29350 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC15.33■□□□□ 0.04
PTPN6P29350 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
PTPN6P29350 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
PTPN6P29350 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
PTPN6P29350 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
PTPN6P29350 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
PTPN6P29350 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
PTPN6P29350 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC15.33■□□□□ 0.04
PTPN6P29350 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC15.33■□□□□ 0.04
PTPN6P29350 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
PTPN6P29350 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC15.33■□□□□ 0.04
PTPN6P29350 AC092474.2-201ENST00000424288 719 ntBASIC15.33■□□□□ 0.04
PTPN6P29350 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
PTPN6P29350 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC15.33■□□□□ 0.04
PTPN6P29350 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC15.33■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms