Protein–RNA interactions for Protein: P25067

COL8A2, Collagen alpha-2(VIII) chain, humanhuman

Predictions only

Length 703 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A2P25067 POU5F1P6-201ENST00000466990 990 ntBASIC13.65□□□□□ -0.22
COL8A2P25067 SERBP1P5-201ENST00000510079 1181 ntBASIC13.65□□□□□ -0.22
COL8A2P25067 AC009407.1-201ENST00000568958 598 ntBASIC13.65□□□□□ -0.22
COL8A2P25067 AC026979.3-201ENST00000607315 403 ntBASIC13.65□□□□□ -0.22
COL8A2P25067 AC010735.2-201ENST00000607970 584 ntTSL 4 BASIC13.65□□□□□ -0.22
COL8A2P25067 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
COL8A2P25067 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC13.65□□□□□ -0.22
COL8A2P25067 TDG-209ENST00000544861 1387 ntTSL 2 BASIC13.65□□□□□ -0.22
COL8A2P25067 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
COL8A2P25067 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC13.65□□□□□ -0.22
COL8A2P25067 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
COL8A2P25067 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
COL8A2P25067 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
COL8A2P25067 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC13.65□□□□□ -0.22
COL8A2P25067 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
COL8A2P25067 F11R-206ENST00000621309 4770 ntTSL 5 BASIC13.65□□□□□ -0.22
COL8A2P25067 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
COL8A2P25067 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
COL8A2P25067 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC13.65□□□□□ -0.23
COL8A2P25067 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.23
COL8A2P25067 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
COL8A2P25067 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
COL8A2P25067 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
COL8A2P25067 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC13.64□□□□□ -0.23
COL8A2P25067 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC13.64□□□□□ -0.23
COL8A2P25067 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
COL8A2P25067 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC13.64□□□□□ -0.23
COL8A2P25067 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
COL8A2P25067 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
COL8A2P25067 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
COL8A2P25067 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
COL8A2P25067 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
COL8A2P25067 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
COL8A2P25067 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC13.64□□□□□ -0.23
COL8A2P25067 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
COL8A2P25067 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
COL8A2P25067 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
COL8A2P25067 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
COL8A2P25067 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
COL8A2P25067 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC13.64□□□□□ -0.23
COL8A2P25067 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
COL8A2P25067 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
COL8A2P25067 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
COL8A2P25067 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
COL8A2P25067 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC13.64□□□□□ -0.23
COL8A2P25067 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
COL8A2P25067 CENPM-206ENST00000407253 818 ntTSL 2 BASIC13.64□□□□□ -0.23
COL8A2P25067 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
COL8A2P25067 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC13.64□□□□□ -0.23
COL8A2P25067 AC009477.1-201ENST00000452936 217 ntBASIC13.64□□□□□ -0.23
COL8A2P25067 AL139010.1-201ENST00000454878 894 ntBASIC13.64□□□□□ -0.23
COL8A2P25067 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
COL8A2P25067 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC13.64□□□□□ -0.23
COL8A2P25067 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC13.64□□□□□ -0.23
COL8A2P25067 POLD4-211ENST00000539074 714 ntTSL 3 BASIC13.64□□□□□ -0.23
COL8A2P25067 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC13.64□□□□□ -0.23
COL8A2P25067 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC13.64□□□□□ -0.23
COL8A2P25067 PAM16-215ENST00000577031 548 ntTSL 4 BASIC13.64□□□□□ -0.23
COL8A2P25067 AL365330.1-201ENST00000607459 531 ntBASIC13.64□□□□□ -0.23
COL8A2P25067 AL844908.2-201ENST00000609461 460 ntBASIC13.64□□□□□ -0.23
COL8A2P25067 HFE2-206ENST00000634927 506 ntTSL 4 BASIC13.64□□□□□ -0.23
COL8A2P25067 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC13.64□□□□□ -0.23
COL8A2P25067 RAB34-223ENST00000636154 730 ntTSL 2 BASIC13.64□□□□□ -0.23
COL8A2P25067 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC13.64□□□□□ -0.23
COL8A2P25067 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
COL8A2P25067 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
COL8A2P25067 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
COL8A2P25067 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC13.64□□□□□ -0.23
COL8A2P25067 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC13.64□□□□□ -0.23
COL8A2P25067 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
COL8A2P25067 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
COL8A2P25067 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC13.64□□□□□ -0.23
COL8A2P25067 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC13.64□□□□□ -0.23
COL8A2P25067 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
COL8A2P25067 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
COL8A2P25067 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC13.64□□□□□ -0.23
COL8A2P25067 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC13.64□□□□□ -0.23
COL8A2P25067 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC13.64□□□□□ -0.23
COL8A2P25067 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC13.64□□□□□ -0.23
COL8A2P25067 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC13.64□□□□□ -0.23
COL8A2P25067 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC13.64□□□□□ -0.23
COL8A2P25067 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
COL8A2P25067 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
COL8A2P25067 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC13.63□□□□□ -0.23
COL8A2P25067 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC13.63□□□□□ -0.23
COL8A2P25067 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC13.63□□□□□ -0.23
COL8A2P25067 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC13.63□□□□□ -0.23
COL8A2P25067 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
COL8A2P25067 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
COL8A2P25067 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
COL8A2P25067 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
COL8A2P25067 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC13.63□□□□□ -0.23
COL8A2P25067 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
COL8A2P25067 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC13.63□□□□□ -0.23
COL8A2P25067 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
COL8A2P25067 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
COL8A2P25067 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
COL8A2P25067 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
COL8A2P25067 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC13.63□□□□□ -0.23
COL8A2P25067 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC13.63□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 26.2 ms