Protein–RNA interactions for Protein: P20338

RAB4A, Ras-related protein Rab-4A, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB4AP20338 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
RAB4AP20338 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC12.46□□□□□ -0.41
RAB4AP20338 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC12.46□□□□□ -0.41
RAB4AP20338 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC12.46□□□□□ -0.41
RAB4AP20338 IRX5-204ENST00000560154 879 ntTSL 5 BASIC12.46□□□□□ -0.41
RAB4AP20338 C2orf69P3-201ENST00000565542 1120 ntBASIC12.46□□□□□ -0.41
RAB4AP20338 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC12.46□□□□□ -0.41
RAB4AP20338 AL512604.3-201ENST00000569583 964 ntBASIC12.46□□□□□ -0.41
RAB4AP20338 TEN1-204ENST00000588202 862 ntTSL 3 BASIC12.46□□□□□ -0.41
RAB4AP20338 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC12.46□□□□□ -0.41
RAB4AP20338 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC12.46□□□□□ -0.41
RAB4AP20338 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
RAB4AP20338 AL049637.2-201ENST00000641778 930 ntBASIC12.46□□□□□ -0.41
RAB4AP20338 SGTB-201ENST00000381007 5469 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
RAB4AP20338 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
RAB4AP20338 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
RAB4AP20338 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
RAB4AP20338 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC12.46□□□□□ -0.42
RAB4AP20338 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
RAB4AP20338 GID4-201ENST00000268719 4237 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
RAB4AP20338 EPHB3-201ENST00000330394 4236 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
RAB4AP20338 GALC-206ENST00000544807 2528 ntTSL 2 BASIC12.46□□□□□ -0.42
RAB4AP20338 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC12.46□□□□□ -0.42
RAB4AP20338 UNC5A-201ENST00000329542 3812 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
RAB4AP20338 PIK3IP1-201ENST00000215912 2467 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
RAB4AP20338 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC12.46□□□□□ -0.42
RAB4AP20338 DLX1-201ENST00000341900 2130 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
RAB4AP20338 AL603832.2-201ENST00000566195 2125 ntBASIC12.46□□□□□ -0.42
RAB4AP20338 MAN1B1-202ENST00000371589 2769 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
RAB4AP20338 PCDHA2-202ENST00000520672 3056 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
RAB4AP20338 FBXO45-202ENST00000440469 3689 ntTSL 2 BASIC12.46□□□□□ -0.42
RAB4AP20338 TASP1-201ENST00000337743 2352 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
RAB4AP20338 RUBCNL-201ENST00000378781 3322 ntAPPRIS ALT2 TSL 2 BASIC12.45□□□□□ -0.42
RAB4AP20338 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC12.45□□□□□ -0.42
RAB4AP20338 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
RAB4AP20338 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
RAB4AP20338 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
RAB4AP20338 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC12.45□□□□□ -0.42
RAB4AP20338 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC12.45□□□□□ -0.42
RAB4AP20338 KLHL21-201ENST00000377658 4487 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
RAB4AP20338 AMACR-203ENST00000382072 2919 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
RAB4AP20338 NSD2-206ENST00000382895 7827 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
RAB4AP20338 MSL2-201ENST00000309993 4692 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
RAB4AP20338 CYP4F11-204ENST00000591841 2531 ntTSL 2 BASIC12.45□□□□□ -0.42
RAB4AP20338 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
RAB4AP20338 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
RAB4AP20338 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
RAB4AP20338 AC097374.2-201ENST00000618617 1306 ntBASIC12.45□□□□□ -0.42
RAB4AP20338 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
RAB4AP20338 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
RAB4AP20338 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
RAB4AP20338 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC12.45□□□□□ -0.42
RAB4AP20338 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
RAB4AP20338 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
RAB4AP20338 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
RAB4AP20338 ENSA-206ENST00000361631 725 ntTSL 2 BASIC12.45□□□□□ -0.42
RAB4AP20338 Telomerase-vert.1-201ENST00000363312 438 ntBASIC12.45□□□□□ -0.42
RAB4AP20338 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
RAB4AP20338 MTCL1P1-201ENST00000446207 792 ntBASIC12.45□□□□□ -0.42
RAB4AP20338 RBM17P1-201ENST00000453646 1190 ntBASIC12.45□□□□□ -0.42
RAB4AP20338 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC12.45□□□□□ -0.42
RAB4AP20338 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC12.45□□□□□ -0.42
RAB4AP20338 FITM1-202ENST00000559294 800 ntBASIC12.45□□□□□ -0.42
RAB4AP20338 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC12.45□□□□□ -0.42
RAB4AP20338 AP003071.4-201ENST00000562276 1284 ntBASIC12.45□□□□□ -0.42
RAB4AP20338 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC12.45□□□□□ -0.42
RAB4AP20338 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC12.45□□□□□ -0.42
RAB4AP20338 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC12.45□□□□□ -0.42
RAB4AP20338 USP3-204ENST00000540797 5474 ntTSL 2 BASIC12.45□□□□□ -0.42
RAB4AP20338 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
RAB4AP20338 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC12.45□□□□□ -0.42
RAB4AP20338 SEPT6-204ENST00000360156 2609 ntAPPRIS ALT1 TSL 1 (best) BASIC12.45□□□□□ -0.42
RAB4AP20338 IL21R-AS1-201ENST00000563191 2615 ntTSL 2 BASIC12.45□□□□□ -0.42
RAB4AP20338 LIG1-203ENST00000536218 3179 ntAPPRIS ALT2 TSL 2 BASIC12.45□□□□□ -0.42
RAB4AP20338 IFNAR2-202ENST00000342136 2899 ntAPPRIS P4 TSL 1 (best) BASIC12.45□□□□□ -0.42
RAB4AP20338 COL9A2-202ENST00000372748 2862 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
RAB4AP20338 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
RAB4AP20338 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC12.45□□□□□ -0.42
RAB4AP20338 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
RAB4AP20338 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC12.45□□□□□ -0.42
RAB4AP20338 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
RAB4AP20338 ABCB8-201ENST00000297504 2487 ntTSL 2 BASIC12.45□□□□□ -0.42
RAB4AP20338 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
RAB4AP20338 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
RAB4AP20338 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
RAB4AP20338 TBX3-202ENST00000349155 4723 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
RAB4AP20338 HBP1-212ENST00000485846 2420 ntAPPRIS P1 TSL 2 BASIC12.45□□□□□ -0.42
RAB4AP20338 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
RAB4AP20338 ZBTB1-201ENST00000358738 4119 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
RAB4AP20338 SMARCA2-209ENST00000382203 5867 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
RAB4AP20338 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC12.44□□□□□ -0.42
RAB4AP20338 FLI1-205ENST00000527786 4127 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
RAB4AP20338 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC12.44□□□□□ -0.42
RAB4AP20338 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
RAB4AP20338 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
RAB4AP20338 LINC01101-201ENST00000622953 1884 ntBASIC12.44□□□□□ -0.42
RAB4AP20338 ITGA6-202ENST00000409080 5306 ntTSL 2 BASIC12.44□□□□□ -0.42
RAB4AP20338 TRABD2B-202ENST00000606738 7034 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
RAB4AP20338 PHTF1-204ENST00000369604 3273 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
RAB4AP20338 AC010460.3-201ENST00000511359 1579 ntBASIC12.44□□□□□ -0.42
Retrieved 100 of 98,524 protein–RNA pairs in 47.1 ms